Evidence map›Paper›PMID 17970914›Full record

ArticleJournal of microscopy2007

Characterization of spectral FRET imaging microscopy for monitoring nuclear protein interactions.

Ye Chen, Joshua P Mauldin, Richard N Day, Ammasi Periasamy

Open access · greenAbstract read
In one paragraph

Article in Journal of microscopy, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
10.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 82 citations in OpenAlex.

  1. Review
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  5. Review
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  12. Understanding FRET as a research tool for cellular studies.International journal of molecular sciences · 2015
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Assessing FRET using spectral techniques.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2013
    Article
  18. Förster resonance energy transfer microscopy and spectroscopy for localizing protein-protein interactions in living cells.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2013
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ye ChenW.M. Keck Center for Cellular Imaging, Departments of Biology and Biomedical Engineering, Gilmer Hall, University of Virginia, Charlottesville, VA 22904, USA.
Joshua P Mauldin
Richard N Day
Ammasi Periasamy
University of Virginia · USUniversity of Virginia Health System · US

Funding

MULTIPHOTON SPECTRAL IMAGING MICROSCOPY: NEUROSCIENCE, TAU PROTEIN, &TBI RESS10RR021202 · NCRR · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI PERIASAMY, AMMASI · 2005 to 2005
$500k
NCRR NIH HHS RR021202NCRR NIH HHS S10 RR021202NIDDK NIH HHS DK47301
6 · The paper itself

Abstract

The spectral processed Förster resonance energy transfer (psFRET) imaging method provides an effective and fast method for measuring protein-protein interactions in living specimens. The commercially available linear unmixing algorithms efficiently remove the contribution of donor spectral bleedthrough to the FRET signal. However, the acceptor contribution to spectral bleedthrough in the FRET image cannot be similarly removed, since the acceptor spectrum is identical to the FRET spectrum. Here, we describe the development of a computer algorithm that measures and removes the contaminating ASBT signal in the sFRET image. The new method is characterized in living cells that expressed FRET standards in which the donor and acceptor fluorescent proteins are tethered by amino acid linkers of specific lengths. The method is then used to detect the homo-dimerization of a transcription factor in the nucleus of living cells, and then to measure the interactions of that protein with a second transcription factor.

Indexed as

AlgorithmsAnimalsCell LineCell NucleusDimerizationFluorescence Resonance Energy TransferFluorescent DyesMiceProtein BindingProteinsRecombinant Fusion ProteinsSensitivity and SpecificityTranscription FactorsFluorescent DyesProteinsRecombinant Fusion ProteinsTranscription Factors

Identifiers

PMID17970914
PMCPMC2874973
OpenAlexW1975555760

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.