Evidence map›Paper›PMID 17967886›Full record

ArticleMolecular and cellular biology2008

Establishment of a novel in vivo sex-specific splicing assay system to identify a trans-acting factor that negatively regulates splicing of Bombyx mori dsx female exons.

Masataka G Suzuki, Shigeo Imanishi, Naoshi Dohmae, Tomoe Nishimura, Toru Shimada, Shogo Matsumoto

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 86 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Theme and variation in the evolution of insect sex determination.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2023
    Review
  7. Article
  8. A database of crop pest cell lines.In vitro cellular & developmental biology. Animal · 2022
    Article
  9. Identification and Characterization of the Masculinizing Function of theInternational journal of molecular sciences · 2021
    Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Spliceosomal Protein GeneInternational journal of molecular sciences · 2020
    Article
  15. Article
  16. P-element Somatic Inhibitor Protein Binding a Target Sequence inInternational journal of molecular sciences · 2019
    Article
  17. Unique sex determination system in the silkworm, Bombyx mori: current status and beyond.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2018
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Masataka G SuzukiLaboratory of Molecular Entomology, The Institute of Physical and Chemical Research 2-1, Hirosawa, Wako, Saitama 351-0198, Japan. smatsu@riken.jp
Shigeo Imanishi
Naoshi Dohmae
Tomoe Nishimura
Toru Shimada
Shogo Matsumoto
RIKEN · JPInstitute of Agrobiological Sciences · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Bombyx mori homolog of doublesex, Bmdsx, plays an essential role in silkworm sexual development. Exons 3 and 4 of Bmdsx pre-mRNA are specifically excluded in males. To explore how this occurs, we developed a novel in vivo sex-specific splicing assay system using sexually differentiated cultured cells. A series of mutation analyses using a Bmdsx minigene with this in vivo splicing assay system identified three distinct sequences (CE1, CE2, and CE3) positioned in exon 4 as exonic splicing silencers responsible for male-specific splicing. Gel shift analysis showed that CE1 binds to a nuclear protein from male cells but not that from female cells. Mutation of UAA repeats within CE1 inhibited the binding of the nuclear protein to the RNA and caused female-specific splicing in male cells. We have identified BmPSI, a Bombyx homolog of P-element somatic inhibitor (PSI), as the nuclear factor that specifically binds CE1. Down-regulation of endogenous BmPSI by RNA interference significantly increased female-specific splicing in male cells. This is the first report of a PSI homolog implicated in the regulated sex-specific splicing of dsx pre-mRNA.

Indexed as

Genetic TechniquesAnimalsBase SequenceBombyxCell LineDNA-Binding ProteinsDown-RegulationExonsFemaleMaleMolecular Sequence DataNuclear ProteinsProtein BindingRecombinant ProteinsRNA SplicingSex CharacteristicsDNA-Binding ProteinsNuclear ProteinsRecombinant ProteinsTrans-Activators

Identifiers

PMID17967886
PMCPMC2223278
OpenAlexW2133616621

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.