Evidence map›Paper›PMID 17967881›Full record

ArticleMolecular and cellular biology2008

Genomic imprinting of Dopa decarboxylase in heart and reciprocal allelic expression with neighboring Grb10.

Trevelyan R Menheniott, Kathryn Woodfine, Reiner Schulz, Andrew J Wood, David Monk, Andrew S Giraud, H Scott Baldwin, Gudrun E Moore, Rebecca J Oakey

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
  2. Cardiac Roles of Serotonin (5-HT) and 5-HT-Receptors in Health and Disease.International journal of molecular sciences · 2023
    Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Selected imprinting of INS in the marsupial.Epigenetics & chromatin · 2012
    Article
  17. A survey of tissue-specific genomic imprinting in mammals.Molecular genetics and genomics : MGG · 2012
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Trevelyan R MenheniottKing's College London, Department of Medical and Molecular Genetics, 8th Floor Guy's Tower, London SE1 9RT, England.
Kathryn Woodfine
Reiner Schulz
Andrew J Wood
David Monk
Andrew S Giraud
H Scott Baldwin
Gudrun E Moore
Rebecca J Oakey
Guy's Hospital · GBUniversity College London · GBKing's College London · GBMurdoch Children's Research Institute · AUVanderbilt University Medical Center · US

Funding

Wellcome Trust 071002
6 · The paper itself

Abstract

By combining a tissue-specific microarray screen with mouse uniparental duplications, we have identified a novel imprinted gene, Dopa decarboxylase (Ddc), on chromosome 11. Ddc_exon1a is a 2-kb transcript variant that initiates from an alternative first exon in intron 1 of the canonical Ddc transcript and is paternally expressed in trabecular cardiomyocytes of the embryonic and neonatal heart. Ddc displays tight conserved linkage with the maternally expressed and methylated Grb10 gene, suggesting that these reciprocally imprinted genes may be coordinately regulated. In Dnmt3L mutant embryos that lack maternal germ line methylation imprints, we show that Ddc is overexpressed and Grb10 is silenced. Their imprinting is therefore dependent on maternal germ line methylation, but the mechanism at Ddc does not appear to involve differential methylation of the Ddc_exon1a promoter region and may instead be provided by the oocyte mark at Grb10. Our analysis of Ddc redefines the imprinted Grb10 domain on mouse proximal chromosome 11 and identifies Ddc_exon1a as the first example of a heart-specific imprinted gene.

Indexed as

AllelesAdenosine TriphosphatasesAnimalsATPases Associated with Diverse Cellular ActivitiesBase SequenceCytoskeletal ProteinsDNA (Cytosine-5-)-MethyltransferasesDNA MethylationDopa DecarboxylaseExonsGenomic ImprintingGRB10 Adaptor ProteinHumansMiceMice, TransgenicMicrofilament ProteinsAdenosine TriphosphatasesATPases Associated with Diverse Cellular ActivitiesCobl protein, mouseCytoskeletal ProteinsDNA (Cytosine-5-)-MethyltransferasesDnmt3l protein, mouseDopa DecarboxylaseFIGNL1 protein, mouseGRB10 Adaptor ProteinMicrofilament ProteinsMicrotubule-Associated ProteinsNuclear ProteinsProteins

Identifiers

PMID17967881
PMCPMC2223316
OpenAlexW2131924970

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.