Evidence map›Paper›PMID 17965092›Full record

ArticleNucleic acids research2007

A novel method for generating and screening peptides and libraries displayed on adenovirus fiber.

Shawn E Lupold, Tarana A Kudrolli, Wasim H Chowdhury, Ping Wu, Ronald Rodriguez

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.5field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Gene Therapy Leaves a Vicious Cycle.Frontiers in oncology · 2019
    Review
  7. Review
  8. Article
  9. Infectivity-selective oncolytic adenovirus developed by high-throughput screening of adenovirus-formatted library.Molecular therapy : the journal of the American Society of Gene Therapy · 2013
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Shawn E LupoldJames Buchanan Brady Urology Institute, Johns Hopkins University School of Medicine, Broadway Research Building 467, 733N Broadway, Baltimore, MD 21205, USA. slupold@jhmi.edu
Tarana A Kudrolli
Wasim H Chowdhury
Ping Wu
Ronald Rodriguez
Johns Hopkins Medicine · USJohns Hopkins University · US

Funding

TRANSGENIC MODELS FOR PROSTATE CANCER AND AUTOIMMUNITYP50CA058236 · NCI · JOHNS HOPKINS UNIVERSITY · PI DENMEADE, SAMUEL R · 1992 to 2020
$43.9M
Development of Highly Targeted, Imageable Adenoviral Vectors for Prostate CancerR01CA121153 · NCI · JOHNS HOPKINS UNIVERSITY · PI RODRIGUEZ, RONALD · 2007 to 2011
$1.5M
NCI NIH HHS 1R01CA121153-01A2NCI NIH HHS 2P50CA58236-09A1NCI NIH HHS P50 CA058236NCI NIH HHS R01 CA121153
6 · The paper itself

Abstract

Capsid-displayed adenoviral peptide libraries have been a significant, yet unfeasible goal in biotechnology. Three barriers have made this difficult: the large size of the viral genome, the low efficiency of converting plasmid-based genomes into packaged adenovirus and the fact that library amplification is hampered by the ability of two (or more) virus to co-infect one cell. Here, we present a novel vector system, pFex, which is capable of overcoming all three barriers. With pFex, modified fiber genes are recombined into the natural genetic locus of adenovirus through unidirectional Cre-lox recombination. Modified-fiber genes can be directly shuttled into replicating viral genomes in mammalian cells. The 'acceptor' vector does not contain the fiber gene, and therefore does not propagate until it has received a 'donor' fiber gene. Therefore, This methodology overcomes the low efficiency of transfecting large viral genomes and bypasses the need for transition to functional virus. Thus, with a fiber-shuttle library, one can generate and evaluate large numbers of fiber-modified adenovirus simultaneously. Finally, successful fiber genes can be rescued from virus and recombined back into shuttle plasmids, avoiding the need to propagate mixed viral pools. For proof of principal, we use this new system to screen a capsid-displayed peptide library for retargeted viral infection.

Indexed as

Genetic TechniquesGenetic VectorsPeptide LibraryAdenoviridaeAnimalsCell LineComputer TerminalsHumansMiceRecombination, GeneticPeptide Library

Identifiers

PMID17965092
PMCPMC2175307
OpenAlexW2056074289

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.