Evidence map›Paper›PMID 17962298›Full record

ArticleNucleic acids research2007

Domain I of ribosomal protein L1 is sufficient for specific RNA binding.

Svetlana Tishchenko, Ekaterina Nikonova, Vladislav Kljashtorny, Olga Kostareva, Natalia Nevskaya, Wolfgang Piendl, Natalia Davydova, Victor Streltsov, Maria Garber, Stanislav Nikonov

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 21 citations in OpenAlex.

  1. Engineering of Surface Display Systems inBiotech (Basel (Switzerland)) · 2026
    Article
  2. Review
  3. Extraribosomal Functions of Bacterial Ribosomal Proteins-An Update, 2023.International journal of molecular sciences · 2024
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 4 countries.

Svetlana TishchenkoInstitute of Protein Research, Russian Academy of Sciences, 142290 Pushchino, Moscow region, Russia.
Ekaterina Nikonova
Vladislav Kljashtorny
Olga Kostareva
Natalia Nevskaya
Wolfgang Piendl
Natalia Davydova
Victor Streltsov
Maria Garber
Stanislav Nikonov
Innsbruck Medical University · ATLudwig Cancer Research · AULudwig Cancer Research · BERussian Academy of Sciences · RUCommonwealth Scientific and Industrial Research Organisation · AUInstitute of Protein Research · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ribosomal protein L1 has a dual function as a ribosomal protein binding 23S rRNA and as a translational repressor binding its mRNA. L1 is a two-domain protein with N- and C-termini located in domain I. Earlier it was shown that L1 interacts with the same targets on both rRNA and mRNA mainly through domain I. We have suggested that domain I is necessary and sufficient for specific RNA-binding by L1. To test this hypothesis, a truncation mutant of L1 from Thermus thermophilus, representing domain I, was constructed by deletion of the central part of the L1 sequence, which corresponds to domain II. It was shown that the isolated domain I forms stable complexes with specific fragments of both rRNA and mRNA. The crystal structure of the isolated domain I was determined and compared with the structure of this domain within the intact protein L1. This comparison revealed a close similarity of both structures. Our results confirm our suggestion that in protein L1 its domain I alone is sufficient for specific RNA binding, whereas domain II stabilizes the L1-rRNA complex.

Indexed as

Amino Acid SequenceBacterial ProteinsBinding SitesCrystallography, X-RayModels, MolecularMolecular Sequence DataProtein BindingProtein Structure, TertiaryRibosomal ProteinsRNA, MessengerRNA, Ribosomal, 23SThermus thermophilusBacterial Proteinsribosomal protein L1Ribosomal ProteinsRNA, MessengerRNA, Ribosomal, 23S

Identifiers

PMID17962298
PMCPMC2175363
OpenAlexW2132409278

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.