Evidence map›Paper›PMID 17959737›Full record

ArticleJournal of neurophysiology2008

IQ-motif proteins influence intracellular free Ca2+ in hippocampal neurons through their interactions with calmodulin.

Yoshihisa Kubota, John A Putkey, Harel Z Shouval, M Neal Waxham

Open access · greenAbstract read
In one paragraph

Article in Journal of neurophysiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.4field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  5. Review
  6. Opposing Intermolecular Tuning of CaBiophysical journal · 2017
    Article
  7. Article
  8. Review
  9. Ca(2+) sensor proteins in dendritic spines: a race for Ca(2+).Frontiers in molecular neuroscience · 2012
    Article
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  18. Regional differences in hippocampal calcium handling provide a cellular mechanism for limiting plasticity.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yoshihisa KubotaDepartment of Neurobiology and Anatomy, University of Texas Medical School, 6431 Fannin, Houston, Texas 77030, USA. Yoshihisa.Kubota@uth.tmc.edu
John A Putkey
Harel Z Shouval
M Neal Waxham

Funding

Neural Models of Plasticity: Molecules to NetworksP01NS038310 · NINDS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI BYRNE, JOHN H · 1999 to 2009
$9.3M
Calcium-Dependent Protein RegulationR01GM069611 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI PUTKEY, JOHN ANTHONY · 2005 to 2008
$1.1M
Training in NeuroplasticityT32NS041226 · NINDS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI WAXHAM, M. NEAL · 2001 to 2005
$748k
NIGMS NIH HHS GM-069611NIGMS NIH HHS R01 GM069611NINDS NIH HHS NS-038310NINDS NIH HHS NS-041226NINDS NIH HHS P01 NS038310NINDS NIH HHS T32 NS041226
6 · The paper itself

Abstract

Calmodulin (CaM) is most recognized for its role in activating Ca(2+)-CaM-dependent enzymes following increased intracellular Ca(2+). However, CaM's high intracellular concentration indicates CaM has the potential to play a significant role as a Ca(2+) buffer. Neurogranin (Ng) is a small neuronal IQ-motif-containing protein that accelerates Ca(2+) dissociation from CaM. In cells that contain high concentrations of both Ng and CaM, like CA1 pyramidal neurons, we hypothesize that the accelerated Ca(2+) dissociation from CaM by Ng decreases the buffering capacity of CaM and thereby shapes the transient dynamics of intracellular free Ca(2+). We examined this hypothesis using a mathematical model constructed on the known biochemistry of Ng and confirmed the simulation results with Ca(2+) imaging data in the literature. In a single-compartment model that contains no Ca(2+) extrusion mechanism, Ng increased the steady-state free Ca(2+). However, in the presence of a Ca(2+) extrusion mechanism, Ng accelerated the decay rate of free Ca(2+) through its ability to increase the Ca(2+) dissociation from CaM, which in turn becomes subject to Ca(2+) extrusion. Interestingly, PEP-19, another neuronal IQ-motif protein that accelerates both Ca(2+) association and dissociation from CaM, appears to have the opposite impact than that of Ng on free Ca(2+). As such, Ng may regulate, in addition to the Ca(2+)-CaM-dependent process, Ca(2+)-sensitive enzymes by influencing the buffering capacity of CaM and subsequently free Ca(2+) levels. We examined the relative impact of these Ng-induced effects in the induction of synaptic plasticity.

Indexed as

Action PotentialsAmino Acid MotifsAnimalsBuffersCalciumCalcium SignalingCalmodulinComputer SimulationCytoplasmHippocampusHumansIntracellular FluidMiceMice, KnockoutModels, NeurologicalNerve Tissue ProteinsBuffersCalciumCalmodulinNerve Tissue ProteinsNeurograninPcp4 protein, mouse

Identifiers

PMID17959737
PMCPMC3622048
OpenAlexW2018578596

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.