Evidence map›Paper›PMID 17951517›Full record

ArticleEukaryotic cell2007

Conserved processes and lineage-specific proteins in fungal cell wall evolution.

Juan E Coronado, Saad Mneimneh, Susan L Epstein, Wei-Gang Qiu, Peter N Lipke

Abstract read
In one paragraph

Article in Eukaryotic cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. The Interference ofJournal of fungi (Basel, Switzerland) · 2026
    Article
  2. Article
  3. Endocytic tethers modulate unconventional GAPDH secretion.Cell surface (Amsterdam, Netherlands) · 2025
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Composition and biosynthetic machinery of theCell surface (Amsterdam, Netherlands) · 2019
    Article
  15. Identification of Antifungal Targets Based on Computer Modeling.Journal of fungi (Basel, Switzerland) · 2018
    Review
  16. What We Do Not Know about Fungal Cell Adhesion Molecules.Journal of fungi (Basel, Switzerland) · 2018
    Review
  17. Fungal Strategies to Evade the Host Immune Recognition.Journal of fungi (Basel, Switzerland) · 2017
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Juan E CoronadoDepartment of Biological Sciences, Hunter College, City University of New York, New York, New York 10021, USA.
Saad Mneimneh
Susan L Epstein
Wei-Gang Qiu
Peter N Lipke

Funding

UBIQUITINATED PROTEIN DEGRADATION AND NEURODEGENERATIONS06GM060654 · NIGMS · HUNTER COLLEGE · PI LUINE, VICTORIA N · 2000 to 2011
$21.2M
Ru(II) Complexes for Chemotherapy of Malaria and CancerS06GM076168 · NIGMS · BROOKLYN COLLEGE · PI DAVENPORT, LESLEY · 2006 to 2009
$3.4M
NCRR NIH HHS RR 030307NIGMS NIH HHS S06 GM 060654NIGMS NIH HHS S06 GM060654NIGMS NIH HHS S06 GM 076168NIGMS NIH HHS S06 GM076168
6 · The paper itself

Abstract

The cell wall is a defining organelle that differentiates fungi from its sister clades in the opisthokont superkingdom. With a sensitive technique to align low-complexity protein sequences, we have identified 187 cell wall-related proteins in Saccharomyces cerevisiae and determined the presence or absence of homologs in 17 other fungal genomes. There were both conserved and lineage-specific cell wall proteins, and the degree of conservation was strongly correlated with protein function. Some functional classes were poorly conserved and lineage specific: adhesins, structural wall glycoprotein components, and unannotated open reading frames. These proteins are primarily those that are constituents of the walls themselves. On the other hand, glycosyl hydrolases and transferases, proteases, lipases, proteins in the glycosyl phosphatidyl-inositol-protein synthesis pathway, and chaperones were strongly conserved. Many of these proteins are also conserved in other eukaryotes and are associated with wall synthesis in plants. This gene conservation, along with known similarities in wall architecture, implies that the basic architecture of fungal walls is ancestral to the divergence of the ascomycetes and basidiomycetes. The contrasting lineage specificity of wall resident proteins implies diversification. Therefore, fungal cell walls consist of rapidly diversifying proteins that are assembled by the products of an ancestral and conserved set of genes.

Indexed as

Gene Expression RegulationGene Expression Regulation, FungalAmino Acid MotifsCell LineageCell WallDisulfidesEvolution, MolecularGenomeGenome, FungalGlycoproteinsModels, BiologicalOpen Reading FramesProtein Structure, TertiarySaccharomyces cerevisiaeSpecies SpecificityDisulfidesGlycoproteins

Identifiers

PMID17951517
PMCPMC2168262

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.