Evidence map›Paper›PMID 17949828›Full record

ArticleMolecular and biochemical parasitology2007

Evidence for a capping enzyme with specificity for the trypanosome spliced leader RNA.

Jia-Peng Ruan, Shuiyuan Shen, Elisabetta Ullu, Christian Tschudi

Open access · greenAbstract read
In one paragraph

Article in Molecular and biochemical parasitology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. LeishIF3d is a non-canonical cap-binding protein inFrontiers in molecular biosciences · 2023
    Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. The messenger RNA decapping and recapping pathway in Trypanosoma.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jia-Peng RuanDepartment of Epidemiology & Public Health, Yale University Medical School, 295 Congress Avenue, New Haven, CT 06536-0812, USA.
Shuiyuan Shen
Elisabetta Ullu
Christian Tschudi
Yale University · US

Funding

RNA CAPPING IN TRYPANOSOMESR01AI043594 · NIAID · YALE UNIVERSITY · PI TSCHUDI, CHRISTIAN · 1998 to 2012
$4.5M
NIAID NIH HHS AI43594NIAID NIH HHS R01 AI043594
6 · The paper itself

Abstract

Capping of the pre-mRNA 5' end by addition a monomethylated guanosine cap (m(7)G) is an essential and the earliest modification in the biogenesis of mRNA. The reaction is catalyzed by three enzymes: triphosphatase, guanylyltransferase, and (guanine N-7) methyltransferase. Whereas this modification occurs co-transcriptionally in most eukaryotic organisms, trypanosomatid protozoa mRNAs acquire the m(7)G cap by trans-splicing, which entails the transfer of the capped spliced leader (SL) from the SL RNA to the mRNA. Intriguingly, the genomes of all trypanosomatid protozoa sequenced to date possess two distinct proteins with the signature motifs of guanylyltransferases: TbCGM1 and the previously characterized TbCE1. Here we provide biochemical evidence that TbCgm1 is a capping enzyme. Whereas RNAi-induced downregulation of TbCe1 had no phenotypic consequences, we found that TbCGM1 is essential for trypanosome viability and is required for SL RNA capping. Furthermore, consistent with co-transcriptional addition of the m(7)G cap, chromatin immunoprecipitation revealed recruitment of TbCgm1 to the SL RNA genes.

Indexed as

AnimalsCell SurvivalChromatin ImmunoprecipitationGenes, EssentialGene SilencingNucleotidyltransferasesProtein BindingProtozoan ProteinsRNA CapsRNA InterferenceRNA, Spliced LeaderSubstrate SpecificityTrypanosoma brucei bruceiCGM1 protein, Trypanosoma bruceiNucleotidyltransferasesProtozoan ProteinsRNA CapsRNA, Spliced Leader

Identifiers

PMID17949828
PMCPMC2706020
OpenAlexW2047311318

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.