Evidence map›Paper›PMID 17942643›Full record

ArticleJournal of clinical microbiology2007

Detection and typing of human herpesvirus 6 by molecular methods in specimens from patients diagnosed with encephalitis or meningitis.

Norma P Tavakoli, Seela Nattanmai, Rene Hull, Heather Fusco, Lela Dzigua, Heng Wang, Michelle Dupuis

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it, 59 citations in OpenAlex.

  1. Guideline
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Chemokines encoded by herpesviruses.Journal of leukocyte biology · 2017
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Norma P TavakoliWadsworth Center, New York State Department of Health, Albany, NY, USA. norma.tavakoli@wadsworth.org
Seela Nattanmai
Rene Hull
Heather Fusco
Lela Dzigua
Heng Wang
Michelle Dupuis
New York State Department of Health · US

Funding

Emerging Infections Program-HAIU01CI000311 · CI · NYSDOH/HEALTH RESEARCH, INC. · PI BIRKHEAD, GUTHRIE S · 2005 to 2011
$25.8M
Training in the Epidemiology of HPV/Cervical Neoplasia Among HIV+ WomenD43TW000233 · FIC · SUNY DOWNSTATE MEDICAL CENTER · PI DEHOVITZ, JACK A · 1993 to 2015
$10.1M
NYS International Research Training ProgramD43TW007384 · FIC · WADSWORTH CENTER · PI BIRKHEAD, GUTHRIE S · 2005 to 2009
$702k
FIC NIH HHS 1 D43 TW007384-01FIC NIH HHS 2 D43 TW000233-11FIC NIH HHS D43 TW000233FIC NIH HHS D43 TW007384NCPDCID CDC HHS U01 CI000311NCPDCID CDC HHS U01/CI000311
6 · The paper itself

Abstract

Human herpesvirus 6 (HHV-6) was detected in specimens from patients hospitalized with symptoms of encephalitis or meningitis. A real-time PCR assay was developed which has a linear dynamic range of 5 to 5 x 10(6) copies of HHV-6 and a sensitivity of five gene copies per reaction. While the assay detects both subtypes, HHV-6A and HHV-6B, it is specific and does not cross-react with a selected specificity panel. A total of 1,482 patient specimens, which were collected between 2003 and 2007, were tested; 26 specimens from 24 patients were found to be positive for HHV-6 by real-time PCR. The HHV-6 detection rate in this population was therefore 1.75%. The majority of the specimens tested (>95%) were cerebrospinal fluid (CSF) specimens. We were able to type 20 of the 26 positive specimens by conventional PCR and sequence analysis; all were HHV-6B. Forty-two percent of the patients were 3 years of age or younger, which may indicate a primary infection in these patients. Given the ages of the remaining patients (from 4 to 81 years), their infections were most probably due to virus reactivations. Where information was available, symptoms of patients included fever (71%), altered mental status (67%), and abnormal CSF profile (75%). Fifty percent of patients of 3 years of age or younger suffered from seizures. The detection of HHV-6 in specimens from patients diagnosed with encephalitis or meningitis, in the absence of a positive PCR result for other agents, strongly suggests a role for HHV-6 in the pathogenesis of these central nervous system diseases.

Indexed as

AdolescentAdultAgedAged, 80 and overAge FactorsCerebrospinal FluidChildChild, PreschoolDNA, ViralEncephalitis, ViralFemaleHerpesvirus 6, HumanHumansInfantMaleMeningitis, ViralDNA, Viral

Identifiers

PMID17942643
PMCPMC2168559
OpenAlexW2149524398

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.