Evidence map›Paper›PMID 17938736›Full record

ArticleEnvironmental health perspectives2007

Identification of gene markers for formaldehyde exposure in humans.

Guang-Yong Li, Hye-Young Lee, Ho-Sang Shin, Hyeon-Young Kim, Cheol-Hong Lim, Byung-Hoon Lee

Open access · diamondAbstract readValidation Study
In one paragraph

Article in Environmental health perspectives, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Guang-Yong LiCollege of Pharmacy and Research Institute of Pharmaceutical Sciences, Seoul National University, Seoul, Republic of Korea.
Hye-Young Lee
Ho-Sang Shin
Hyeon-Young Kim
Cheol-Hong Lim
Byung-Hoon Lee
Seoul National University · KRKorea Occupational Safety and Health Agency · KRKongju National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFormaldehyde (FA) is classified as a human carcinogen and has been linked to increased leukemia rates in some epidemiologic studies. Inhalation of FA induces sensory irritation at relatively low concentrations. However, little is known concerning the cellular alterations observed after FA exposure in humans.

objectivesOur aim was to profile global gene expression in Hs 680.Tr human tracheal fibroblasts exposed to FA and to develop biomarkers for the evaluation of FA exposure in humans. METHODS AND

resultsWe used gene expression analysis, and identified 54 genes designated as FA responsive. On the basis of these data, we conducted an exploratory analysis of the expression of these genes in human subjects exposed to high or low levels of FA. We monitored FA exposure by measuring the urinary concentration of thiazolidine-4-carboxylate (TZCA), a stable and quantitative cysteinyl adduct of FA. Nine genes were selected for real-time PCR analysis; of these, BHLHB2, CCNL1, SE20-4, C8FW, PLK2, and SGK showed elevated expression in subjects with high concentrations of TZCA.

conclusionThe identification of gene marker candidates in vitro using microarray analysis and their validation using human samples obtained from exposed subjects is a good tool for discovering genes of potential mechanistic interest and biomarkers of exposure. Thus, these genes are differentially expressed in response to FA and are potential effect biomarkers of FA exposure.

Indexed as

Gene Expression ProfilingOligonucleotide Array Sequence AnalysisBasic Helix-Loop-Helix ProteinsBiomarkersCell LineComplement C8CyclinsDNA-Binding ProteinsEnvironmental ExposureFibroblastsFormaldehydeHomeodomain ProteinsHumansImmediate-Early ProteinsNuclear ProteinsProtein Serine-Threonine KinasesBasic Helix-Loop-Helix ProteinsBHLHE40 protein, humanBiomarkersC8G protein, humanCCNL1 protein, humanComplement C8CyclinsDNA-Binding ProteinsFormaldehydeHomeodomain ProteinsImmediate-Early ProteinsNuclear ProteinsProtein Serine-Threonine KinasesSerum-Glucocorticoid Regulated Kinasesthiazolidine-4-carboxylic acidThiazolidinesTSPYL2 protein, humanbiomarkercarcinogenesisformaldehydehuman studymicroarraytoxicogenomics

Identifiers

PMID17938736
PMCPMC2022670
OpenAlexW2004164234

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.