Evidence map›Paper›PMID 17933898›Full record

ArticleJournal of bacteriology2007

A horizontal gene transfer event defines two distinct groups within Burkholderia pseudomallei that have dissimilar geographic distributions.

Apichai Tuanyok, Raymond K Auerbach, Thomas S Brettin, David C Bruce, A Christine Munk, J Chris Detter, Talima Pearson, Heidie Hornstra, Rasana W Sermswan, Vanaporn Wuthiekanun and 4 more

Abstract readComparative Study
In one paragraph

Article in Journal of bacteriology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed.

  1. Emergence of Human and Animal Melioidosis in Southern Africa, 2018-2021.Tropical medicine and infectious disease · 2026
    Article
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  5. The Genomic Epidemiology of ClinicalPathogens (Basel, Switzerland) · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Frontiers in veterinary science · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Characterization ofVeterinary world · 2020
    Article
  17. Human Melioidosis.Clinical microbiology reviews · 2020
    Review
  18. An Evolutionary Arms Race BetweenFrontiers in microbiology · 2020
    Review
  19. Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Apichai TuanyokDepartment of Biological Sciences, Northern Arizona University, Flagstaff, AZ 86011-5640, USA.
Raymond K Auerbach
Thomas S Brettin
David C Bruce
A Christine Munk
J Chris Detter
Talima Pearson
Heidie Hornstra
Rasana W Sermswan
Vanaporn Wuthiekanun
Sharon J Peacock
Bart J Currie
Paul Keim
David M Wagner

Funding

Vaccines and Diagnostics TrialsU54AI065359 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI BARBOUR, ALAN G. · 2005 to 2013
$88.8M
NIAID NIH HHS U54 AI065359Wellcome Trust
6 · The paper itself

Abstract

Burkholderia pseudomallei is the etiologic agent of melioidosis. Many disease manifestations are associated with melioidosis, and the mechanisms causing this variation are unknown; genomic differences among strains offer one explanation. We compared the genome sequences of two strains of B. pseudomallei: the original reference strain K96243 from Thailand and strain MSHR305 from Australia. We identified a variable homologous region between the two strains. This region was previously identified in comparisons of the genome of B. pseudomallei strain K96243 with the genome of strain E264 from the closely related B. thailandensis. In that comparison, K96243 was shown to possess a horizontally acquired Yersinia-like fimbrial (YLF) gene cluster. Here, we show that the homologous genomic region in B. pseudomallei strain 305 is similar to that previously identified in B. thailandensis strain E264. We have named this region in B. pseudomallei strain 305 the B. thailandensis-like flagellum and chemotaxis (BTFC) gene cluster. We screened for these different genomic components across additional genome sequences and 571 B. pseudomallei DNA extracts obtained from regions of endemicity. These alternate genomic states define two distinct groups within B. pseudomallei: all strains contained either the BTFC gene cluster (group BTFC) or the YLF gene cluster (group YLF). These two groups have distinct geographic distributions: group BTFC is dominant in Australia, and group YLF is dominant in Thailand and elsewhere. In addition, clinical isolates are more likely to belong to group YLF, whereas environmental isolates are more likely to belong to group BTFC. These groups should be further characterized in an animal model.

Indexed as

Evolution, MolecularGene Transfer, HorizontalAustraliaBurkholderia pseudomalleiChromosomes, BacterialDNA, BacterialEnvironmental MicrobiologyGenotypeHumansMelioidosisMolecular EpidemiologyMolecular Sequence DataMultigene FamilySequence Analysis, DNASequence HomologySyntenyDNA, Bacterial

Identifiers

PMID17933898
PMCPMC2168593

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.