Evidence map›Paper›PMID 17933775›Full record

ArticleNucleic acids research2008

Gallus GBrowse: a unified genomic database for the chicken.

Carl J Schmidt, Michael Romanov, Oliver Ryder, Vincent Magrini, Matthew Hickenbotham, Jarret Glasscock, Sean McGrath, Elaine Mardis, Lincoln D Stein

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Review
  3. HGFDB: a collective database of helmeted guinea fowl genomics.Database : the journal of biological databases and curation · 2021
    Article
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Carl J SchmidtDepartment of Animal and Food Sciences, University of Delaware, Newark, DE 19706, USA. schmidtc@udel.edu
Michael Romanov
Oliver Ryder
Vincent Magrini
Matthew Hickenbotham
Jarret Glasscock
Sean McGrath
Elaine Mardis
Lincoln D Stein
Washington University in St. Louis · USCold Spring Harbor Laboratory · USZoological Society of San Diego · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gallus GBrowse (http://birdbase.net/cgi-bin/gbrowse/gallus/) provides online access to genomic and other information about the chicken, Gallus gallus. The information provided by this resource includes predicted genes and Gene Ontology (GO) terms, links to Gallus In Situ Hybridization Analysis (GEISHA), Unigene and Reactome, the genomic positions of chicken genetic markers, SNPs and microarray probes, and mappings from turkey, condor and zebra finch DNA and EST sequences to the chicken genome. We also provide a BLAT server (http://birdbase.net/cgi-bin/webBlat) for matching user-provided sequences to the chicken genome. These tools make the Gallus GBrowse server a valuable resource for researchers seeking genomic information regarding the chicken and other avian species.

Indexed as

Databases, GeneticGenomicsAnimalsChickensChromosome MappingGene Expression ProfilingGenetic MarkersInternetPolymorphism, Single NucleotideSoftwareUser-Computer InterfaceGenetic Markers

Identifiers

PMID17933775
PMCPMC2238981
OpenAlexW2079057647

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.