ArticleNucleic acids research2008
MetaCrop: a detailed database of crop plant metabolism.
Article in Nucleic acids research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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Who cites it
20 citing papers in PubMed.
- Sustainable software development in science - insights from 20 years of Vanted.Journal of integrative bioinformatics · 2025Article
- RefMetaPlant: a reference metabolome database for plants across five major phyla.Nucleic acids research · 2024Article
- Integrating omics databases for enhanced crop breeding.Journal of integrative bioinformatics · 2023Review
- Design considerations for representing systems biology information with the Systems Biology Graphical Notation.Journal of integrative bioinformatics · 2022Article
- Exploring synergies between plant metabolic modelling and machine learning.Computational and structural biotechnology journal · 2022Review
- In silico metabolic network analysis of Arabidopsis leaves.BMC systems biology · 2016Article
- Understanding Plant Nitrogen Metabolism through Metabolomics and Computational Approaches.Plants (Basel, Switzerland) · 2016Review
- Metabolomics, Standards, and Metabolic Modeling for Synthetic Biology in Plants.Frontiers in bioengineering and biotechnology · 2015Review
- FluxMap: a VANTED add-on for the visual exploration of flux distributions in biological networks.BMC systems biology · 2012Article
- Creating interactive, web-based and data-enriched maps with the Systems Biology Graphical Notation.Nature protocols · 2012Article
- MMMDB: Mouse Multiple Tissue Metabolome Database.Nucleic acids research · 2012Article
- MetaCrop 2.0: managing and exploring information about crop plant metabolism.Nucleic acids research · 2012Article
- A case study for efficient management of high throughput primary lab data.BMC research notes · 2011Article
- Creating views on integrated multidomain data.Bioinformatics (Oxford, England) · 2011Article
- Editing, validating and translating of SBGN maps.Bioinformatics (Oxford, England) · 2010Article
- Creation of a genome-wide metabolic pathway database for Populus trichocarpa using a new approach for reconstruction and curation of metabolic pathways for plants.Plant physiology · 2010Article
- A generic algorithm for layout of biological networks.BMC bioinformatics · 2009Article
- Metabolite signal identification in accurate mass metabolomics data with MZedDB, an interactive m/z annotation tool utilising predicted ionisation behaviour 'rules'.BMC bioinformatics · 2009Article
- How large is the metabolome? A critical analysis of data exchange practices in chemistry.PloS one · 2009Article
- Barley genomics: An overview.International journal of plant genomics · 2008Article
Corrections and comments
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Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
MetaCrop is a manually curated repository of high quality information concerning the metabolism of crop plants. This includes pathway diagrams, reactions, locations, transport processes, reaction kinetics, taxonomy and literature. MetaCrop provides detailed information on six major crop plants with high agronomical importance and initial information about several other plants. The web interface supports an easy exploration of the information from overview pathways to single reactions and therefore helps users to understand the metabolism of crop plants. It also allows model creation and automatic data export for detailed models of metabolic pathways therefore supporting systems biology approaches. The MetaCrop database is accessible at http://metacrop.ipk-gatersleben.de.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.