Evidence map›Paper›PMID 17932491›Full record

ArticleThe EMBO journal2007

Vinculin binding in its closed conformation by a helix addition mechanism.

Guy Tran Van Nhieu, Tina Izard

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Functional comparison of full-length palladin to isolated actin binding domain.Protein science : a publication of the Protein Society · 2023
    Article
  3. Review
  4. Manipulation of Focal Adhesion Signaling by Pathogenic Microbes.International journal of molecular sciences · 2021
    Review
  5. Article
  6. Article
  7. The interaction of talin with the cell membrane is essential for integrin activation and focal adhesion formation.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  8. Article
  9. Article
  10. Differential lipid binding of vinculin isoforms promotes quasi-equivalent dimerization.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  11. Article
  12. Review
  13. The interaction of vinculin with actin.PLoS computational biology · 2013
    Article
  14. αE-catenin is an autoinhibited molecule that coactivates vinculin.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  15. Article
  16. Article
  17. Article
  18. α-Catenin uses a novel mechanism to activate vinculin.The Journal of biological chemistry · 2012
    Article
  19. Vinculin motion modes analysis with elastic network model.International journal of molecular sciences · 2012
    Article
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Guy Tran Van NhieuUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, Inserm U786, Paris, France.
Tina Izard
Scripps Research Institute · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
STRUCTURAL DYNAMICS OF VINCULIN IN ADHESION JUNCTIONSR01GM071596 · NIGMS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI IZARD, TINA · 2004 to 2012
$3.1M
Pathogen-host Interactions that Remodel the CytoskeletonR01AI067949 · NIAID · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI IZARD, TINA · 2006 to 2010
$2.0M
NCI NIH HHS CA21765NCI NIH HHS P30 CA021765NIAID NIH HHS AI067949NIAID NIH HHS R01 AI067949NIGMS NIH HHS GM071596NIGMS NIH HHS R01 GM071596
6 · The paper itself

Abstract

Vinculin links integrin receptors to the actin cytoskeleton by binding to talin. Vinculin is held in an inactive, closed-clamp conformation through hydrophobic interactions between its head and tail domains, and vinculin activation has long been thought to be dependent upon severing the head-tail interaction. Talin, alpha-actinin, and the invasin IpaA of Shigella flexneri sever vinculin's head-tail interaction by inserting an alpha-helix into vinculin's N-terminal four-helical bundle, provoking extensive conformational changes by a helical bundle conversion mechanism; these alterations in vinculin structure displace its tail domain, allowing vinculin to bind to its other partners. IpaA harbors two juxtaposed alpha-helical vinculin-binding sites (VBS) in its C-terminus. Here, we report that the lower affinity VBS of IpaA can also bind to the adjacent C-terminal four-helical bundle of vinculin's head domain through a helix addition mechanism. These hydrophobic interactions do not alter the conformation of this helical bundle, and the architecture of the complex suggests that IpaA can simultaneously interact with both of the four-helical bundle domains of vinculin's N-terminus to stabilize vinculin-IpaA interactions.

Indexed as

ActininActinsBinding SitesCell AdhesionCrystallography, X-RayCytoskeletonHumansModels, MolecularMolecular ConformationProtein BindingProtein ConformationProtein Structure, SecondaryProtein Structure, TertiaryVinculinActininActinsVinculin

Identifiers

PMID17932491
PMCPMC2063484
OpenAlexW2139096664

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.