Evidence map›Paper›PMID 17928336›Full record

ArticleJournal of virology2007

Nef-mediated enhancement of virion infectivity and stimulation of viral replication are fundamental properties of primate lentiviruses.

Jan Münch, Devi Rajan, Michael Schindler, Anke Specht, Elke Rücker, Francis J Novembre, Eric Nerrienet, Michaela C Müller-Trutwin, Martine Peeters, Beatrice H Hahn and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 117 citations in OpenAlex.

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  8. Adaptation of SIVmac to baboon primary cells results in complete absence ofFrontiers in cellular and infection microbiology · 2024
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  11. HIV-1 restriction by SERINC5.Medical microbiology and immunology · 2023
    Review
  12. Article
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  19. Article
  20. Review

27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 4 countries.

Jan MünchInstitute of Virology, University of Ulm, Albert Einstein Allee 11, D-89081 Ulm, Germany.
Devi Rajan
Michael Schindler
Anke Specht
Elke Rücker
Francis J Novembre
Eric Nerrienet
Michaela C Müller-Trutwin
Martine Peeters
Beatrice H Hahn
Frank Kirchhoff
Universität Ulm · DECentre Pasteur du Cameroun · CMEmory University · USInstitut de Recherche pour le Développement · FRInstitut Pasteur · FRUniversity of Alabama at Birmingham · US

Funding

Role of specific Nef functions in AIDS pathogenesisR01AI067057 · NIAID · UNIVERSITY OF ULM · PI KIRCHHOFF, FRANK · 2006 to 2008
$558k
NIAID NIH HHS 1R01AI067057-01A2NIAID NIH HHS R01 AI067057
6 · The paper itself

Abstract

Nef is a multifunctional accessory protein of primate lentiviruses. Recently, it has been shown that the ability of Nef to downmodulate CD4, CD28, and class I major histocompatibility complex is highly conserved between most or all primate lentiviruses, whereas Nef-mediated downregulation of T-cell receptor-CD3 was lost in the lineage that gave rise to human immunodeficiency virus type 1 (HIV-1). Whether or not other Nef activities are preserved between different groups of primate lentiviruses remained to be determined. Here, we show that nef genes from a large variety of HIVs and simian immunodeficiency viruses (SIVs) enhance virion infectivity and stimulate viral replication in human cells and/or in ex vivo infected human lymphoid tissue (HLT). Notably, nef alleles from unpassaged SIVcpz and SIVsmm enhanced viral infectivity, replication, and cytopathicity in cell culture and in ex vivo infected HLT as efficiently as those from HIV-1 and HIV-2, their human counterparts. Furthermore, nef genes from several highly divergent SIVs that have not been found in humans were also highly active in human cells and/or tissues. Thus, most primate lentiviral Nefs enhance virion infectivity and stimulate viral replication. Moreover, our data show that SIVcpz and SIVsmm Nefs do not require adaptive changes to perform these functions in human cells or tissues and support the idea that nef alleles from other primate lentiviruses would also be capable of promoting efficient virus spread in humans.

Indexed as

AnimalsCell LineHeLa CellsHIV-1Humansnef Gene Products, Human Immunodeficiency VirusOrgan Culture TechniquesPalatine TonsilSimian Immunodeficiency VirusViral Regulatory and Accessory ProteinsVirionVirus Replicationnef Gene Products, Human Immunodeficiency VirusNEF protein, SIVViral Regulatory and Accessory Proteins

Identifiers

PMID17928336
PMCPMC2168858
OpenAlexW2105021838

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.