Evidence map›Paper›PMID 17927842›Full record

ArticleBMC molecular biology2007

Transcriptional regulation of human eosinophil RNases by an evolutionary- conserved sequence motif in primate genome.

Hsiu-Yu Wang, Hao-Teng Chang, Tun-Wen Pai, Chung-I Wu, Yuan-Hung Lee, Yen-Hsin Chang, Hsiu-Ling Tai, Chuan-Yi Tang, Wei-Yao Chou, Margaret Dah-Tsyr Chang

Open access · hybridAbstract readComparative Study
In one paragraph

Article in BMC molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Hsiu-Yu WangInstitute of Molecular and Cellular Biology & Department of Life Science, National Tsing Hua University, Hsinchu, Taiwan 30013, Republic of China. d928220@oz.nthu.edu.tw
Hao-Teng Chang
Tun-Wen Pai
Chung-I Wu
Yuan-Hung Lee
Yen-Hsin Chang
Hsiu-Ling Tai
Chuan-Yi Tang
Wei-Yao Chou
Margaret Dah-Tsyr Chang
National Tsing Hua University · TWNational Taiwan Ocean University · TWUniversity of Chicago · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHuman eosinophil-derived neurotoxin (edn) and eosinophil cationic protein (ecp) are members of a subfamily of primate ribonuclease (rnase) genes. Although they are generated by gene duplication event, distinct edn and ecp expression profile in various tissues have been reported.

resultsIn this study, we obtained the upstream promoter sequences of several representative primate eosinophil rnases. Bioinformatic analysis revealed the presence of a shared 34-nucleotide (nt) sequence stretch located at -81 to -48 in all edn promoters and macaque ecp promoter. Such a unique sequence motif constituted a region essential for transactivation of human edn in hepatocellular carcinoma cells. Gel electrophoretic mobility shift assay, transient transfection and scanning mutagenesis experiments allowed us to identify binding sites for two transcription factors, Myc-associated zinc finger protein (MAZ) and SV-40 protein-1 (Sp1), within the 34-nt segment. Subsequent in vitro and in vivo binding assays demonstrated a direct molecular interaction between this 34-nt region and MAZ and Sp1. Interestingly, overexpression of MAZ and Sp1 respectively repressed and enhanced edn promoter activity. The regulatory transactivation motif was mapped to the evolutionarily conserved -74/-65 region of the edn promoter, which was guanidine-rich and critical for recognition by both transcription factors.

conclusionOur results provide the first direct evidence that MAZ and Sp1 play important roles on the transcriptional activation of the human edn promoter through specific binding to a 34-nt segment present in representative primate eosinophil rnase promoters.

Indexed as

Gene Expression Regulation, EnzymologicGenomeAnimalsBase SequenceBinding SitesCells, CulturedConserved SequenceDNA-Binding ProteinsEosinophil Cationic ProteinEosinophil-Derived NeurotoxinEosinophilsEvolution, MolecularHumansMolecular Sequence DataPhylogenyPrimatesc-MYC-associated zinc finger proteinDNA-Binding ProteinsEosinophil Cationic ProteinEosinophil-Derived NeurotoxinRibonucleasesSp1 Transcription FactorTranscription Factors

Identifiers

PMID17927842
PMCPMC2174947
OpenAlexW2070741346

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.