ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2007
Untranslated leader region polymorphism of Tvv1, a retrotransposon family, is a novel marker useful for analyzing genetic diversity and relatedness in the genus Vitis.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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Who cites it
11 citing papers in PubMed.
- Development and interlaboratory validation of a cultivar-specific identification method for the table grape 'Shine Muscat' using loop-mediated isothermal amplification (LAMP).Breeding science · 2025Article
- The Cypriot Indigenous Grapevine Germplasm Is a Multi-Clonal Varietal Mixture.Plants (Basel, Switzerland) · 2020Article
- Use of SSR and retrotransposon-based markers to interpret the population structure of native grapevines from southern Italy.Molecular biotechnology · 2014Article
- The Tvv1 retrotransposon family is conserved between plant genomes separated by over 100 million years.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014Article
- Genetic diversity and population structure assessed by SSR and SNP markers in a large germplasm collection of grape.BMC plant biology · 2013Article
- High throughput analysis of grape genetic diversity as a tool for germplasm collection management.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011Article
- Review
- General and species-specific transcriptional responses to downy mildew infection in a susceptible (Vitis vinifera) and a resistant (V. riparia) grapevine species.BMC genomics · 2010Article
- Characterization of ten novel Ty1/copia-like retrotransposon families of the grapevine genome.BMC genomics · 2008Article
- Genomic amplification of the Gret1 retroelement in white-fruited accessions of wild vitis and interspecific hybrids.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2008Article
- Structural variability of Tvv1 grapevine retrotransposons can be caused by illegitimate recombination.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2008Article
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Abstract
Grapevine retrotransposons belonging to the Tvv1 family share a single, highly conserved open reading frame but differ by their untranslated leader (UTL) region, which is highly variable in size. Amplification of the UTL region of Tvv1 elements from 94 Vitaceae accessions reveals that each of them shows a unique pattern of UTL-derived bands, which is inherited in progenies but conserved between clones vegetatively propagated. The overall organization of genetic diversity of the Vitaceae at the inter and intraspecific level and relatedness among accessions described by UTL-derived bands was compared to those obtained using 15 microsatellite loci. Both fingerprinting methods show a similar grouping of Vitis vinifera accessions but UTL-based fingerprinting more accurately isolates the muscadine grapes from the American and Asian Vitis. Finally, sequence analysis of seven UTL regions determines that their size variation is essentially caused by large deletions/insertions within the internal region, whereas flanking regions are more conserved. UTL-based fingerprinting could be considered as a novel marker system specific of the genus Vitis; moreover, as this multiband genotype is stable between clones it is suitable to be used as a "DNA barcode" for Vitis identification.
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