Evidence map›Paper›PMID 17925861›Full record

ArticlePloS one2007

Variable expression of Cre recombinase transgenes precludes reliable prediction of tissue-specific gene disruption by tail-biopsy genotyping.

Tim J Schulz, Markus Glaubitz, Doreen Kuhlow, René Thierbach, Marc Birringer, Pablo Steinberg, Andreas F H Pfeiffer, Michael Ristow

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. TheBiomedicines · 2020
    Article
  5. Analysis of Cre-mediated genetic deletion ofAmerican journal of physiology. Heart and circulatory physiology · 2019
    Article
  6. Cochlea-Specific Deletion of CaFrontiers in cellular neuroscience · 2019
    Article
  7. Review
  8. Article
  9. Article
  10. Mesangial cell αvβ8-integrin regulates glomerular capillary integrity and repair.American journal of physiology. Renal physiology · 2014
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Tim J SchulzUniversity of Jena, Institute of Nutrition, Jena, Germany.
Markus Glaubitz
Doreen Kuhlow
René Thierbach
Marc Birringer
Pablo Steinberg
Andreas F H Pfeiffer
Michael Ristow
German Institute of Human Nutrition · DEUniversity of Potsdam · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Cre/loxP-system has become the system of choice for the generation of conditional so-called knockout mouse strains, i.e. the tissue-specific disruption of expression of a certain target gene. We here report the loss of expression of Cre recombinase in a transgenic mouse strain with increasing number of generations. This eventually led to the complete abrogation of gene expression of the inserted Cre cDNA while still being detectable at the genomic level. Conversely, loss of Cre expression caused an incomplete or even complete lack of disruption for the protein under investigation. As Cre expression in the tissue of interest in most cases cannot be addressed in vivo during the course of a study, our findings implicate the possibility that individual tail-biopsy genotypes may not necessarily indicate the presence or absence of gene disruption. This indicates that sustained post hoc analyses in regards to efficacy of disruption for every single study group member may be required.

Indexed as

Gene Expression RegulationGenotypeTransgenesAnimalsBiopsyDNA, ComplementaryGenes, ReporterGenetic TechniquesIntegrasesMiceMice, TransgenicPhenotypeRecombination, GeneticReproducibility of ResultsSequence Analysis, DNATailCre recombinaseDNA, ComplementaryIntegrases

Identifiers

PMID17925861
PMCPMC1995755
OpenAlexW2015957673

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.