Evidence map›Paper›PMID 17925858›Full record

ArticlePloS one2007

Cellular mRNA activates transcription elongation by displacing 7SK RNA.

Tara M Young, Michael Tsai, Bin Tian, Michael B Mathews, Tsafi Pe'ery

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Tara M YoungDepartment of Biochemistry and Molecular Biology, New Jersey Medical School, Newark, New Jersey, United States of America.
Michael Tsai
Bin Tian
Michael B Mathews
Tsafi Pe'ery
Rutgers, The State University of New Jersey · USRutgers New Jersey Medical School

Funding

Functions of Double-stranded RNA Binding ProteinsR01AI034552 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI MATHEWS, MICHAEL B · 1993 to 2008
$4.4M
Regulation of HIV transcription by Tat and P-TEPbR21AI055331 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI PE'ERY, TSAFI · 2004 to 2004
$389k
NIAID NIH HHS AI034552NIAID NIH HHS AI055331NIAID NIH HHS R01 AI034552NIAID NIH HHS R21 AI055331
6 · The paper itself

Abstract

The positive transcription elongation factor P-TEFb is a pivotal regulator of gene expression in higher cells. Originally identified in Drosophila, attention was drawn to human P-TEFb by the discovery of its role as an essential cofactor for HIV-1 transcription. It is recruited to HIV transcription complexes by the viral transactivator Tat, and to cellular transcription complexes by a plethora of transcription factors. P-TEFb activity is negatively regulated by sequestration in a complex with the HEXIM proteins and 7SK RNA. The mechanism of P-TEFb release from the inhibitory complex is not known. We report that P-TEFb-dependent transcription from the HIV promoter can be stimulated by the mRNA encoding HIC, the human I-mfa domain-containing protein. The 3'-untranslated region of HIC mRNA is necessary and sufficient for this action. It forms complexes with P-TEFb and displaces 7SK RNA from the inhibitory complex in cells and cell extracts. A 314-nucleotide sequence near the 3' end of HIC mRNA has full activity and contains a predicted structure resembling the 3'-terminal hairpin of 7SK that is critical for P-TEFb binding. This represents the first example of a cellular mRNA that can regulate transcription via P-TEFb. Our findings offer a rationale for 7SK being an RNA transcriptional regulator and suggest a practical means for enhancing gene expression.

Indexed as

Gene Expression RegulationPromoter Regions, GeneticTranscription, Genetic3' Untranslated RegionsAnimalsChlorocebus aethiopsCOS CellsDNA, ComplementaryHeLa CellsHIVHIV-1HIV Long Terminal RepeatHumansMiceNIH 3T3 CellsPositive Transcriptional Elongation Factor B3' Untranslated RegionsDNA, ComplementaryPositive Transcriptional Elongation Factor BRNA, Messenger

Identifiers

PMID17925858
PMCPMC1995758
OpenAlexW2114144721

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.