Evidence map›Paper›PMID 17924661›Full record

ArticleBiochemistry2007

Structural basis of disease-causing mutations in hepatocyte nuclear factor 1beta.

Peng Lu, Geun Bae Rha, Young-In Chi

Abstract read
In one paragraph

Article in Biochemistry, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Molecular impact of a novelFrontiers in endocrinology · 2026
    Article
  3. Review
  4. International journal of molecular sciences · 2024
    Review
  5. Renal and Extrarenal Phenotypes in Patients WithKidney international reports · 2024
    Article
  6. Review
  7. Review
  8. Article
  9. Structure of the unique tetrameric STENOFOLIA homeodomain bound with target promoter DNA.Acta crystallographica. Section D, Structural biology · 2021
    Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. New insights into the role of HNF-1β in kidney (patho)physiology.Pediatric nephrology (Berlin, Germany) · 2019
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. HNF1B-associated clinical phenotypes: the kidney and beyond.Pediatric nephrology (Berlin, Germany) · 2016
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Peng LuDepartment of Molecular and Cellular Biochemistry, Center for Structural Biology, University of Kentucky, Lexington, Kentucky 40536, USA.
Geun Bae Rha
Young-In Chi
University of Kentucky · US

Funding

UNDERSTANDING THE MOLECULAR BASIS OF EPIGENETIC TRANSCRIPTIONAL SILENCINGP20RR020171 · NCRR · UNIVERSITY OF KENTUCKY · PI LOUIS HERSH, LOUIS HERSH LOUIS HERSH · 2004 to 2011
$16.5M
NCRR NIH HHS P20 RR020171NCRR NIH HHS P20RR20171
6 · The paper itself

Abstract

HNF1beta is an atypical POU transcription factor that participates in a hierarchical network of transcription factors controlling the development and proper function of vital organs such as liver, pancreas, and kidney. Many inheritable mutations on HNF1beta are the monogenic causes of diabetes and several kidney diseases. To elucidate the molecular mechanism of its function and the structural basis of mutations, we have determined the crystal structure of human HNF1beta DNA binding domain in complex with a high-affinity promoter. Disease-causing mutations have been mapped to our structure, and their predicted effects have been tested by a set of biochemical/ functional studies. These findings together with earlier findings with a homologous protein HNF1alpha, help us to understand the structural basis of promoter recognition by these atypical POU transcription factors and the site-specific functional disruption by disease-causing mutations.

Indexed as

MutationAmino Acid SequenceElectrophoretic Mobility Shift AssayHeLa CellsHepatocyte Nuclear Factor 1-betaHumansModels, MolecularMolecular Sequence DataMutagenesis, Site-DirectedProtein ConformationSequence Homology, Amino AcidHepatocyte Nuclear Factor 1-betaHNF1B protein, human

Identifiers

PMID17924661
PMCPMC2367142
OpenAlexW2102123567

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.