Evidence map›Paper›PMID 17924349›Full record

ArticleAmerican journal of human genetics2007

Mutations in TOPORS cause autosomal dominant retinitis pigmentosa with perivascular retinal pigment epithelium atrophy.

Christina F Chakarova, Myrto G Papaioannou, Hemant Khanna, Irma Lopez, Naushin Waseem, Amna Shah, Torsten Theis, James Friedman, Cecilia Maubaret, Kinga Bujakowska and 16 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 79 citations in OpenAlex.

  1. Article
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  4. TOPORS as a novel causal gene for Joubert syndrome.American journal of medical genetics. Part A · 2023
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  5. Review
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  19. Photoreceptor Cilia and Retinal Ciliopathies.Cold Spring Harbor perspectives in biology · 2017
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 8 institutions in 7 countries.

Christina F ChakarovaInstitute of Ophthalmology, University College London, London, UK.
Myrto G Papaioannou
Hemant Khanna
Irma Lopez
Naushin Waseem
Amna Shah
Torsten Theis
James Friedman
Cecilia Maubaret
Kinga Bujakowska
Brotati Veraitch
Mai M Abd El-Aziz
De Quincy Prescott
Sunil K Parapuram
Wendy A Bickmore
Peter M G Munro
Andreas Gal
Christian P Hamel
Valeria Marigo
Chris P Ponting
Bernd Wissinger
Eberhart Zrenner
Karl Matter
Anand Swaroop
Robert K Koenekoop
Shomi S Bhattacharya
Institute of Ophthalmology · MXUniversity of Michigan · USInserm · FRMcGill University Health Centre · CASTZ eyetrial · DEInstitute of Genetics and Cancer · GBUniversity of Modena and Reggio Emilia · ITUniversity of Oxford · GB

Funding

VIVARIUM MODULEP30EY007003 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI David Antonetti · 1987 to 2026
$17.6M
X-LINKED RETINITIS PIGMENTOSAR01EY007961 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KHANNA, HEMANT · 1994 to 2009
$4.3M
Genetics and therapies of retinal diseasesZ01EY000449 · NEI · NATIONAL EYE INSTITUTE · PI SWAROOP, ANAND · 2008 to 2008
$2.6M
E75 IN THE DEVELOPING DROSOPHILA EYEF31EY007003 · NEI · YALE UNIVERSITY · PI SHILTON, ALYCIA N · 1999 to 2001
$14k
Medical Research Council MC_U137761446NEI NIH HHS F31 EY007003NEI NIH HHS P30 EY007003NEI NIH HHS R01 EY007961
6 · The paper itself

Abstract

We report mutations in the gene for topoisomerase I-binding RS protein (TOPORS) in patients with autosomal dominant retinitis pigmentosa (adRP) linked to chromosome 9p21.1 (locus RP31). A positional-cloning approach, together with the use of bioinformatics, identified TOPORS (comprising three exons and encoding a protein of 1,045 aa) as the gene responsible for adRP. Mutations that include an insertion and a deletion have been identified in two adRP-affected families--one French Canadian and one German family, respectively. Interestingly, a distinct phenotype is noted at the earlier stages of the disease, with an unusual perivascular cuff of retinal pigment epithelium atrophy, which was found surrounding the superior and inferior arcades in the retina. TOPORS is a RING domain-containing E3 ubiquitin ligase and localizes in the nucleus in speckled loci that are associated with promyelocytic leukemia bodies. The ubiquitous nature of TOPORS expression and a lack of mutant protein in patients are highly suggestive of haploinsufficiency, rather than a dominant negative effect, as the molecular mechanism of the disease and make rescue of the clinical phenotype amenable to somatic gene therapy.

Indexed as

Genes, DominantAdolescentAdultBase SequenceChildChromosomes, HumanDNA Mutational AnalysisExonsFemaleHumansMaleMiddle AgedMolecular Sequence DataMutationNeoplasm ProteinsNuclear ProteinsNeoplasm ProteinsNuclear ProteinsTOPORS protein, humanUbiquitin-Protein Ligases

Identifiers

PMID17924349
PMCPMC2265653
OpenAlexW2144015228

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.