Evidence map›Paper›PMID 17922236›Full record

ArticleMolecular genetics and genomics : MGG2008

Genomic expression patterns in cell separation mutants of Schizosaccharomyces pombe defective in the genes sep10 ( + ) and sep15 ( + ) coding for the Mediator subunits Med31 and Med8.

Ida Miklos, Zsolt Szilagyi, Stephen Watt, Erika Zilahi, Gyula Batta, Zsuzsa Antunovics, Klara Enczi, Jürg Bähler, Matthias Sipiczki

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Article in Molecular genetics and genomics : MGG, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Ida MiklosDepartment of Genetics and Applied Microbiology, University of Debrecen, Debrecen, Hungary.
Zsolt Szilagyi
Stephen Watt
Erika Zilahi
Gyula Batta
Zsuzsa Antunovics
Klara Enczi
Jürg Bähler
Matthias Sipiczki
University of Debrecen · HUCancer Research UK · GBWellcome Sanger Institute · GB

Funding

Cancer Research UK A6517Cancer Research UK C9546/A6517Wellcome Trust 077118
6 · The paper itself

Abstract

Cell division is controlled by a complex network involving regulated transcription of genes and postranslational modification of proteins. The aim of this study is to demonstrate that the Mediator complex, a general regulator of transcription, is involved in the regulation of the second phase (cell separation) of cell division of the fission yeast Schizosaccharomyces pombe. In previous studies we have found that the fission yeast cell separation genes sep10 ( + ) and sep15 ( + ) code for proteins (Med31 and Med8) associated with the Mediator complex. Here, we show by genome-wide gene expression profiling of mutants defective in these genes that both Med8 and Med31 control large, partially overlapping sets of genes scattered over the entire genome and involved in diverse biological functions. Six cell separation genes controlled by the transcription factors Sep1 and Ace2 are among the target genes. Since neither sep1 ( + ) nor ace2 ( + ) is affected in the mutant cells, we propose that the Med8 and Med31 proteins act as coactivators of the Sep1-Ace2-dependent cell separation genes. The results also indicate that the subunits of Mediator may contribute to the coordination of cellular processes by fine-tuning of the expression of larger sets of genes.

Indexed as

Genes, FungalBase SequenceCell DivisionChromosome MappingChromosomes, FungalCytoskeletonDNA, FungalDNA PrimersGene Expression ProfilingMutationOligonucleotide Array Sequence AnalysisProtein SubunitsReverse Transcriptase Polymerase Chain ReactionRNA SplicingSchizosaccharomycesSchizosaccharomyces pombe ProteinsDNA, FungalDNA PrimersProtein SubunitsSchizosaccharomyces pombe ProteinsTranscription Factors

Identifiers

PMID17922236
OpenAlexW2092801223

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.