Evidence map›Paper›PMID 17922109›Full record

ArticleArchives of microbiology2008

Porphyromonas gingivalis HmuY and HmuR: further characterization of a novel mechanism of heme utilization.

Teresa Olczak, Aneta Sroka, Jan Potempa, Mariusz Olczak

Open access · greenAbstract read
In one paragraph

Article in Archives of microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 103 citations in OpenAlex.

  1. Article
  2. The survival status ofJournal of oral microbiology · 2026
    Review
  3. Biochemical and functional characterization ofFrontiers in microbiology · 2026
    Article
  4. Article
  5. Review
  6. HmuY proteins of theFrontiers in cellular and infection microbiology · 2025
    Article
  7. Article
  8. Review
  9. Comparative analysis ofMicrobiology spectrum · 2024
    Article
  10. Article
  11. Article
  12. Genomics ofPathogens (Basel, Switzerland) · 2023
    Article
  13. Article
  14. The secretome of the fish pathogenFrontiers in cellular and infection microbiology · 2023
    Article
  15. Article
  16. [Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2022
    Review
  17. Article
  18. Review
  19. Glycation of Host Proteins Increases Pathogenic Potential ofInternational journal of molecular sciences · 2021
    Article
  20. Insertional Inactivation ofMicroorganisms · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Teresa OlczakLaboratory of Biochemistry, Faculty of Biotechnology, University of Wroclaw, Tamka 2, 50-137 Wroclaw, Poland. Teresa.Olczak@biotech.uni.wroc.pl
Aneta Sroka
Jan Potempa
Mariusz Olczak
Jagiellonian University · PLUniversity of Wrocław · PL

Funding

BACTERIAL PROTEINASES IN PERIODONTAL DISEASER01DE009761 · NIDCR · UNIVERSITY OF LOUISVILLE · PI POTEMPA, JAN S · 1991 to 2012
$3.8M
NIDCR NIH HHS DE 09761NIDCR NIH HHS R01 DE009761
6 · The paper itself

Abstract

Porphyromonas gingivalis HmuY is a putative heme-binding lipoprotein associated with the outer membrane. It is part of an operon together with a gene encoding an outer-membrane hemin utilization receptor (HmuR) and four uncharacterized genes. A similar operon organization was found in Bacteroides fragilis and B. thetaiotaomicron, with the former containing an additional HmuY homologue encoded upstream of the hmuR-like gene. In P. gingivalis cultured under heme-limited conditions, a approximately 1-kb hmuY transcript was produced at high levels along with some approximately 3.5 and approximately 9-kb transcripts. Compared with the parental strain, mutants deficient in hmuY or hmuR or hmuY-hmuR gene function grew more slowly and bound lower amounts of hemin and hemoglobin. Significantly, they grew more slowly or were unable to grow when human serum was used as the sole iron/heme source. Analysis of the hmu promoter showed that it is regulated by iron. The HmuY protein normally occurs as a homodimer, but in the presence of hemin it may form tetramers. These results show that HmuY may be the first reported member of a new class of proteins in Porphyromonas and Bacteroides species involved in heme utilization, a function being exerted in conjunction with HmuR, an outer-membrane heme transporter.

Indexed as

Amino Acid SequenceBacterial ProteinsBacteroidesDNA, BacterialGene DeletionGene Expression Regulation, BacterialGene OrderHemeHeminHemoglobinsHumansMembrane Transport ProteinsMolecular Sequence DataMutagenesis, InsertionalOperonPorphyromonas gingivalisBacterial ProteinsDNA, BacterialHemeheme receptorHeminHemoglobinsMembrane Transport ProteinsReceptors, Cell Surface

Identifiers

PMID17922109
PMCPMC2577367
OpenAlexW2041089815

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.