ArticleGenome biology2007
Divergent evolution of arrested development in the dauer stage of Caenorhabditis elegans and the infective stage of Heterodera glycines.
Article in Genome biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed, 49 citations in OpenAlex.
- Beet cyst nematode HsSNARE1 interacts with both AtSNAP2 and AtPR1 and promotes disease in Arabidopsis.Journal of advanced research · 2023Article
- On the role of dauer in the adaptation of nematodes to a parasitic lifestyle.Parasites & vectors · 2021Review
- Dauer signalling pathway model for Haemonchus contortus.Parasites & vectors · 2019Article
- Assessment ofJournal of nematology · 2017Article
- Article
- Identification and functional analysis of secreted effectors from phytoparasitic nematodes.BMC microbiology · 2016Review
- A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica.BMC genomics · 2016Article
- Transcriptional and morphological changes in the transition from mycetophagous to phytophagous phase in the plant-parasitic nematode Bursaphelenchus xylophilus.Molecular plant pathology · 2016Article
- A parasitic nematode releases cytokinin that controls cell division and orchestrates feeding site formation in host plants.Proceedings of the National Academy of Sciences of the United States of America · 2015Article
- Orphan Genes Find a Home: Interspecific Competition and Gene Network Evolution.PLoS genetics · 2015Article
- The cyst nematode effector protein 10A07 targets and recruits host posttranslational machinery to mediate its nuclear trafficking and to promote parasitism in Arabidopsis.The Plant cell · 2015Article
- The genome and life-stage specific transcriptomes of Globodera pallida elucidate key aspects of plant parasitism by a cyst nematode.Genome biology · 2014Article
- Article
- Comparison of transcript profiles in different life stages of the nematode Globodera pallida under different host potato genotypes.Molecular plant pathology · 2012Article
- A macrophage migration inhibitory factor-like tautomerase from Teladorsagia circumcincta (Nematoda: Strongylida).Parasite immunology · 2010Article
- Evolving gene expression: from G to E to GxE.Trends in ecology & evolution · 2009Review
- The transcriptomes of the cattle parasitic nematode Ostertagia ostartagi.Veterinary parasitology · 2009Article
- Article
- Nematode.net update 2008: improvements enabling more efficient data mining and comparative nematode genomics.Nucleic acids research · 2009Article
- Effective and specific in planta RNAi in cyst nematodes: expression interference of four parasitism genes reduces parasitic success.Journal of experimental botany · 2009Article
Corrections and comments
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Authors and funding
14 authors at 7 institutions in 1 country.
Funding
Abstract
backgroundThe soybean cyst nematode Heterodera glycines is the most important parasite in soybean production worldwide. A comprehensive analysis of large-scale gene expression changes throughout the development of plant-parasitic nematodes has been lacking to date.
resultsWe report an extensive genomic analysis of H. glycines, beginning with the generation of 20,100 expressed sequence tags (ESTs). In-depth analysis of these ESTs plus approximately 1,900 previously published sequences predicted 6,860 unique H. glycines genes and allowed a classification by function using InterProScan. Expression profiling of all 6,860 genes throughout the H. glycines life cycle was undertaken using the Affymetrix Soybean Genome Array GeneChip. Our data sets and results represent a comprehensive resource for molecular studies of H. glycines. Demonstrating the power of this resource, we were able to address whether arrested development in the Caenorhabditis elegans dauer larva and the H. glycines infective second-stage juvenile (J2) exhibits shared gene expression profiles. We determined that the gene expression profiles associated with the C. elegans dauer pathway are not uniformly conserved in H. glycines and that the expression profiles of genes for metabolic enzymes of C. elegans dauer larvae and H. glycines infective J2 are dissimilar.
conclusionOur results indicate that hallmark gene expression patterns and metabolism features are not shared in the developmentally arrested life stages of C. elegans and H. glycines, suggesting that developmental arrest in these two nematode species has undergone more divergent evolution than previously thought and pointing to the need for detailed genomic analyses of individual parasite species.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.