Evidence map›Paper›PMID 17916742›Full record

ArticleBlood2008

Neither DNA hypomethylation nor changes in the kinetics of erythroid differentiation explain 5-azacytidine's ability to induce human fetal hemoglobin.

Rodwell Mabaera, Michael R Greene, Christine A Richardson, Sarah J Conine, Courtney D Kozul, Christopher H Lowrey

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 68 citations in OpenAlex.

  1. Trial
  2. Review
  3. Review
  4. Review
  5. Exploring epigenetic and microRNA approaches for γ-globin gene regulation.Experimental biology and medicine (Maywood, N.J.) · 2021
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Evolution of hemoglobin loci and their regulatory elements.Blood cells, molecules & diseases · 2018
    Review
  13. Epigenetic dysfunctional diseases and therapy for infection and inflammation.Biochimica et biophysica acta. Molecular basis of disease · 2017
    Review
  14. Article
  15. Article
  16. Epigenetic regulation of fetal globin gene expression in adult erythroid cells.Translational research : the journal of laboratory and clinical medicine · 2015
    Review
  17. Article
  18. Review
  19. Article
  20. Transcriptional mechanisms underlying hemoglobin synthesis.Cold Spring Harbor perspectives in medicine · 2013
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Rodwell MabaeraDepartment of Pharmacology and Toxicology, Dartmouth Medical School, Hanover, NH, USA.
Michael R Greene
Christine A Richardson
Sarah J Conine
Courtney D Kozul
Christopher H Lowrey
Dartmouth College · USDartmouth–Hitchcock Medical Center · US

Funding

Promoter Chromatin Structure in Fetal Globin SilencingR01HL073442 · NHLBI · DARTMOUTH COLLEGE · PI LOWREY, CHRISTOPHER H. · 2003 to 2010
$2.0M
NHLBI NIH HHS HL73442NHLBI NIH HHS R01 HL073442
6 · The paper itself

Abstract

5-azacytidine (5-Aza) is a potent inducer of fetal hemoglobin (HbF) in people with beta-thalassemia and sickle cell disease. Two models have been proposed to explain this activity. The first is based on the drug's ability to inhibit global DNA methylation, including the fetal globin genes, resulting in their activation. The second is based on 5-Aza's cytotoxicity and observations that HbF production is enhanced during marrow recovery. We tested these models using human primary cells in an in vitro erythroid differentiation system. We found that doses of 5-Aza that produce near maximal induction of gamma-globin mRNA and HbF do not alter cell growth, differentiation kinetics, or cell cycle, but do cause a localized demethylation of the gamma promoter. However, when we reduced gamma promoter methylation to levels equivalent to those seen with 5-Aza or to the lower levels seen in primary fetal erythroid cells using DNMT1 siRNA and shRNA, we observed no induction of gamma-globin mRNA or HbF. These results suggest that 5-Aza induction of HbF is not the result of global DNA demethylation or of changes in differentiation kinetics, but involves an alternative, previously unrecognized mechanism. Other results suggest that posttranscriptional regulation plays an important role in the 5-Aza response.

Indexed as

AdultAntimetabolites, AntineoplasticAzacitidineCell DifferentiationCells, CulturedDNA MethylationErythroid CellsFetal HemoglobinGene Expression RegulationGlobinsHumansKineticsPromoter Regions, GeneticRNA, MessengerRNA, Small InterferingAntimetabolites, AntineoplasticAzacitidineFetal HemoglobinGlobinsRNA, MessengerRNA, Small Interfering

Identifiers

PMID17916742
PMCPMC2200821
OpenAlexW1998584422

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.