Evidence map›Paper›PMID 17916642›Full record

ArticleGenome research2007

Lateral gene transfer between obligate intracellular bacteria: evidence from the Rickettsia massiliae genome.

Guillaume Blanc, Hiroyuki Ogata, Catherine Robert, Stéphane Audic, Jean-Michel Claverie, Didier Raoult

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 1 synthesis or guideline pooled it, 119 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Molecular Detection ofAnimals : an open access journal from MDPI · 2024
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  6. mSphere · 2023
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  7. bioRxiv : the preprint server for biology · 2023
    Article
  8. Article
  9. Cryptic Genes for Interbacterial Antagonism DistinguishFrontiers in cellular and infection microbiology · 2022
    Article
  10. Review
  11. ZoonoticFrontiers in veterinary science · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Rickettsia species in human-parasitizing ticks in Greece.Transactions of the Royal Society of Tropical Medicine and Hygiene · 2016
    Article
  18. Article
  19. Article
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Guillaume BlancStructural and Genomic Information Laboratory, CNRS-UPR 2589, Institut de Biologie Structurale et Microbiologie, IFR 88, Parc Scientifique de Luminy, 13288 Marseille Cedex 9, France. guillaume.blanc@igs.cnrs-mrs.fr
Hiroyuki Ogata
Catherine Robert
Stéphane Audic
Jean-Michel Claverie
Didier Raoult
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rickettsia massiliae is a tick-borne obligate intracellular alpha-proteobacteria causing spotted fever in humans. Here, we present the sequence of its genome, comprising a 1.3-Mb circular chromosome and a 15.3-kb plasmid. The chromosome exhibits long-range colinearity with the other Spotted Fever Group Rickettsia genomes, except for a large fragment specific to R. massiliae that contains 14 tra genes presumably involved in pilus formation and conjugal DNA transfer. We demonstrate that the tra region was acquired recently by lateral gene transfer (LGT) from a species related to Rickettsia bellii. Further analysis of the genomic sequences identifies additional candidates of LGT between Rickettsia. Our study indicates that recent LGT between obligate intracellular Rickettsia is more common than previously thought.

Indexed as

Gene Transfer, HorizontalGenome, BacterialGenes, BacterialMultigene FamilyPhylogenyRickettsiaRickettsia Infections

Identifiers

PMID17916642
PMCPMC2045148
OpenAlexW2131067797

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.