Evidence map›Paper›PMID 17907804›Full record

ArticlePLoS pathogens2007

Structure of the malaria antigen AMA1 in complex with a growth-inhibitory antibody.

Andrew M Coley, Aditi Gupta, Vince J Murphy, Tao Bai, Hanna Kim, Michael Foley, Robin F Anders, Adrian H Batchelor

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 127 citations in OpenAlex.

  1. Trial
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  7. Conformational variability in the D2 loop ofJournal of structural biology: X · 2024
    Article
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  12. Review
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  18. Article
  19. Progress towards the development of aExpert review of vaccines · 2021
    Review
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Andrew M ColeyCooperative Research Center for Diagnostics, Department of Biochemistry, La Trobe University, Victoria, Australia.
Aditi Gupta
Vince J Murphy
Tao Bai
Hanna Kim
Michael Foley
Robin F Anders
Adrian H Batchelor
La Trobe University · AUUniversity of Maryland, Baltimore · US

Funding

Inhibitory epitopes in malaria vaccine candidatesR01AI059229 · NIAID · LA TROBE UNIVERSITY · PI FOLEY, MICHAEL · 2005 to 2009
$957k
NIAID NIH HHS R01 AI059229NIAID NIH HHS R01AI59229
6 · The paper itself

Abstract

Identifying functionally critical regions of the malaria antigen AMA1 (apical membrane antigen 1) is necessary to understand the significance of the polymorphisms within this antigen for vaccine development. The crystal structure of AMA1 in complex with the Fab fragment of inhibitory monoclonal antibody 1F9 reveals that 1F9 binds to the AMA1 solvent-exposed hydrophobic trough, confirming its importance. 1F9 uses the heavy and light chain complementarity-determining regions (CDRs) to wrap around the polymorphic loops adjacent to the trough, but uses a ridge of framework residues to bind to the hydrophobic trough. The resulting 1F9-AMA1-combined buried surface of 2,470 A(2) is considerably larger than previously reported Fab-antigen interfaces. Mutations of polymorphic AMA1 residues within the 1F9 epitope disrupt 1F9 binding and dramatically reduce the binding of affinity-purified human antibodies. Moreover, 1F9 binding to AMA1 is competed by naturally acquired human antibodies, confirming that the 1F9 epitope is a frequent target of immunological attack.

Indexed as

AnimalsAntibodies, MonoclonalAntigen-Antibody ComplexAntigens, ProtozoanBinding Sites, AntibodyCrystallizationCrystallography, X-RayEnzyme-Linked Immunosorbent AssayHumansImmunoglobulin kappa-ChainsMalariaMalaria VaccinesMembrane ProteinsModels, MolecularProtozoan ProteinsAntibodies, MonoclonalAntigen-Antibody ComplexAntigens, Protozoanapical membrane antigen I, PlasmodiumImmunoglobulin kappa-ChainsMalaria VaccinesMembrane ProteinsProtozoan Proteins

Identifiers

PMID17907804
PMCPMC2323298
OpenAlexW1967081540

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.