Evidence map›Paper›PMID 17905995›Full record

ArticleJournal of bacteriology2007

The Myxococcus xanthus Nla4 protein is important for expression of stringent response-associated genes, ppGpp accumulation, and fruiting body development.

Faisury Ossa, Michelle E Diodati, Nora B Caberoy, Krista M Giglio, Mick Edmonds, Mitchell Singer, Anthony G Garza

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
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  4. The σScientific reports · 2021
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  12. A cascade of coregulating enhancer binding proteins initiates and propagates a multicellular developmental program.Proceedings of the National Academy of Sciences of the United States of America · 2011
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Faisury OssaDepartment of Biology, Syracuse University, BRL Room 200, 130 College Place, Syracuse, NY 13244-1220, USA.
Michelle E Diodati
Nora B Caberoy
Krista M Giglio
Mick Edmonds
Mitchell Singer
Anthony G Garza
Syracuse University · USUniversity of California, Davis · US

Funding

UC Davis Biology ProgramR25GM056765 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI GOMES, ALDRIN V. · 1998 to 2019
$9.7M
Control of Initiation of Development in M. xanthusR01GM054592 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI SINGER, MITCHELL H. · 2003 to 2006
$982k
CONTROL OF INITIATION OF DEVELOPMENT IN M XANTHUSR29GM054592 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI SINGER, MITCHELL H. · 1997 to 2001
$250k
NIGMS NIH HHS GM54592NIGMS NIH HHS GM56765BNIGMS NIH HHS R01 GM054592NIGMS NIH HHS R25 GM056765NIGMS NIH HHS R29 GM054592NIGMS NIH HHS T32GM0737
6 · The paper itself

Abstract

Changes in gene expression are important for the landmark morphological events that occur during Myxococcus xanthus fruiting body development. Enhancer binding proteins (EBPs), which are transcriptional activators, play prominent roles in the coordinated expression of developmental genes. A mutation in the EBP gene nla4 affects the timing of fruiting body formation, the morphology of mature fruiting bodies, and the efficiency of sporulation. In this study, we showed that the nla4 mutant accumulates relatively low levels of the stringent nucleotide ppGpp. We also found that the nla4 mutant is defective for early developmental events and for vegetative growth, phenotypes that are consistent with a deficiency in ppGpp accumulation. Further studies revealed that nla4 cells produce relatively low levels of GTP, a precursor of RelA-dependent synthesis of (p)ppGpp. In addition, the normal expression patterns of all stringent response-associated genes tested, including the M. xanthus ppGpp synthetase gene relA, are altered in nla4 mutant cells. These findings indicate that Nla4 is part of regulatory pathway that is important for mounting a stringent response and for initiating fruiting body development.

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsGuanosine TetraphosphateGuanosine TriphosphateMutationMyxococcus xanthusSpores, BacterialTime FactorsTranscription FactorsBacterial ProteinsFruA protein, Myxococcus xanthusGuanosine TetraphosphateGuanosine TriphosphateTranscription Factors

Identifiers

PMID17905995
PMCPMC2168950
OpenAlexW2048144470

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.