Evidence map›Paper›PMID 17904189›Full record

ArticleVision research2008

Retinitis Pigmentosa GTPase Regulator (RPGR) protein isoforms in mammalian retina: insights into X-linked Retinitis Pigmentosa and associated ciliopathies.

Shirley He, Sunil K Parapuram, Toby W Hurd, Babak Behnam, Ben Margolis, Anand Swaroop, Hemant Khanna

Open access · greenAbstract read
In one paragraph

Article in Vision research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 65 citations in OpenAlex.

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  15. PCB126 Exposure Revealed Alterations in m6A RNA Modifications in Transcripts Associated With AHR Activation.Toxicological sciences : an official journal of the Society of Toxicology · 2021
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  16. Review
  17. Translational Read-Through Therapy ofInternational journal of molecular sciences · 2020
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  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Shirley HeDepartment of Ophthalmology and Visual Sciences, University of Michigan, W. K. Kellogg Eye Center, 1000 Wall Street, Ann Arbor, MI 48105, USA.
Sunil K Parapuram
Toby W Hurd
Babak Behnam
Ben Margolis
Anand Swaroop
Hemant Khanna
University of Michigan · US

Funding

X-LINKED RETINITIS PIGMENTOSAR01EY007961 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KHANNA, HEMANT · 1994 to 2009
$4.3M
Genetics and therapies of retinal diseasesZ01EY000449 · NEI · NATIONAL EYE INSTITUTE · PI SWAROOP, ANAND · 2008 to 2008
$2.6M
X-LINKED OCULAR ALBINISM &RETINITIS PIGMENTOSAR29EY007961 · NEI · YALE UNIVERSITY · PI SWAROOP, ANAND · 1989 to 1993
–
NEI NIH HHS EY007961NEI NIH HHS R01 EY007961
6 · The paper itself

Abstract

Mutations in the cilia-centrosomal protein Retinitis Pigmentosa GTPase Regulator (RPGR) are a frequent cause of retinal degeneration. The RPGR gene undergoes complex alternative splicing and encodes multiple protein isoforms. To elucidate the function of major RPGR isoforms (RPGR 1-19 and RPGR ORF15), we have generated isoform-specific antibodies and examined their expression and localization in the retina. Using sucrose-gradient centrifugation, immunofluorescence and co-immunoprecipitation methods, we show that RPGR isoforms localize to distinct sub-cellular compartments in mammalian photoreceptors and associate with a number of cilia-centrosomal proteins. The RCC1-like domain of RPGR, which is present in all major RPGR isoforms, is sufficient to target it to the cilia and centrosomes in cultured cells. Our findings indicate that multiple isotypes of RPGR may perform overlapping yet somewhat distinct transport-related functions in photoreceptors.

Indexed as

AnimalsCarrier ProteinsCattleCell CycleCells, CulturedCentrosomeEye Diseases, HereditaryEye ProteinsGenetic Diseases, X-LinkedHumansMicePhotoreceptor Cells, VertebrateProtein IsoformsRetinaRetinitis PigmentosaSpecies SpecificityCarrier ProteinsEye ProteinsProtein IsoformsRPGR protein, mouse

Identifiers

PMID17904189
PMCPMC2267686
OpenAlexW2008064703

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.