Evidence map›Paper›PMID 17900373›Full record

ArticleBMC dermatology2007

Single nucleotide polymorphism-based genome-wide linkage analysis in Japanese atopic dermatitis families.

Hisako Enomoto, Emiko Noguchi, Shigeruko Iijima, Takenori Takahashi, Kazuhito Hayakawa, Mikako Ito, Toshiyuki Kano, Takeshi Aoki, Yoichi Suzuki, Minori Koga and 4 more

Open access · diamondAbstract read
In one paragraph

Article in BMC dermatology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Molecular Genetic of Atopic dermatitis: An Update.International journal of health sciences · 2016
    Review
  3. Article
  4. Molecular biology of atopic dermatitis.Clinical reviews in allergy & immunology · 2014
    Review
  5. An update on the genetics of atopic dermatitis: scratching the surface in 2009.The Journal of allergy and clinical immunology · 2010
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 1 country.

Hisako EnomotoDepartment of Medical Genetics, Graduate School of Comprehensive Human Sciences, University of Tsukuba, Japan. ch0205531@md.tsukuba.ac.jp
Emiko Noguchi
Shigeruko Iijima
Takenori Takahashi
Kazuhito Hayakawa
Mikako Ito
Toshiyuki Kano
Takeshi Aoki
Yoichi Suzuki
Minori Koga
Mayumi Tamari
Tetsuo Shiohara
Fujio Otsuka
Tadao Arinami
University of Tsukuba · JPKyorin University · JPChiba University · JPIbaraki Prefectural Central Hospital · JPMito Red Cross Hospital · JPMito Saiseikai General Hospital · JPTsukuba Medical Center Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAtopic dermatitis develops as a result of complex interactions between several genetic and environmental factors. To date, 4 genome-wide linkage studies of atopic dermatitis have been performed in Caucasian populations, however, similar studies have not been done in Asian populations. The aim of this study was to identify chromosome regions linked to atopic dermatitis in a Japanese population.

methodsWe used a high-density, single nucleotide polymorphism genotyping assay, the Illumina BeadArray Linkage Mapping Panel (version 4) comprising 5,861 single nucleotide polymorphisms, to perform a genome-wide linkage analysis of 77 Japanese families with 111 affected sib-pairs with atopic dermatitis.

resultsWe found suggestive evidence for linkage with 15q21 (LOD = 2.01, NPL = 2.87, P = .0012) and weak linkage to 1q24 (LOD = 1.26, NPL = 2.44, P = .008).

conclusionWe report the first genome-wide linkage study of atopic dermatitis in an Asian population, and novel loci on chromosomes 15q21 and 1q24 linked to atopic dermatitis. Identification of novel causative genes for atopic dermatitis will advance our understanding of the pathogenesis of atopic dermatitis.

Indexed as

GenomicsPolymorphism, Single NucleotideAdultAgedAsian PeopleDermatitis, AtopicFamily HealthFemaleHumansLod ScoreMaleMiddle Aged

Identifiers

PMID17900373
PMCPMC2082241
OpenAlexW2006349543

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.