Evidence map›Paper›PMID 17898804›Full record

ArticleThe EMBO journal2007

Structural analysis of the ParR/parC plasmid partition complex.

Jakob Møller-Jensen, Simon Ringgaard, Christopher P Mercogliano, Kenn Gerdes, Jan Löwe

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 79 citations in OpenAlex.

  1. Review
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  13. Review
  14. Structure of the ParM filament at 8.5Å resolution.Journal of structural biology · 2013
    Article
  15. Article
  16. Superstructure of the centromeric complex of TubZRC plasmid partitioning systems.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Jakob Møller-JensenMRC-Laboratory of Molecular Biology, Cambridge, UK. jakobm@bmb.sdu.dk
Simon Ringgaard
Christopher P Mercogliano
Kenn Gerdes
Jan Löwe
MRC Laboratory of Molecular Biology · GBNewcastle University · GBUniversity of Southern Denmark · DK

Funding

Medical Research Council MC_U105184326
6 · The paper itself

Abstract

Accurate DNA partition at cell division is vital to all living organisms. In bacteria, this process can involve partition loci, which are found on both chromosomes and plasmids. The initial step in Escherichia coli plasmid R1 partition involves the formation of a partition complex between the DNA-binding protein ParR and its cognate centromere site parC on the DNA. The partition complex is recognized by a second partition protein, the actin-like ATPase ParM, which forms filaments required for the active bidirectional movement of DNA replicates. Here, we present the 2.8 A crystal structure of ParR from E. coli plasmid pB171. ParR forms a tight dimer resembling a large family of dimeric ribbon-helix-helix (RHH)2 site-specific DNA-binding proteins. Crystallographic and electron microscopic data further indicate that ParR dimers assemble into a helix structure with DNA-binding sites facing outward. Genetic and biochemical experiments support a structural arrangement in which the centromere-like parC DNA is wrapped around a ParR protein scaffold. This structure holds implications for how ParM polymerization drives active DNA transport during plasmid partition.

Indexed as

ActinsAmino Acid SequenceBacterial ProteinsBinding SitesCentromereCrystallography, X-RayDimerizationDNA ReplicationDNA Topoisomerase IVEscherichia coliEscherichia coli ProteinsModels, BiologicalModels, MolecularMolecular ConformationMolecular Sequence DataPlasmidsActinsBacterial ProteinsDNA Topoisomerase IVEscherichia coli ProteinsParM protein, E coliParR protein, bacteriaRepressor Proteins

Identifiers

PMID17898804
PMCPMC2034672
OpenAlexW2142439355

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.