Evidence map›Paper›PMID 17898065›Full record

ArticleJournal of virology2007

Acetylated histone H3 and H4 mark the upregulated LMP2A promoter of Epstein-Barr virus in lymphoid cells.

Borbala Gerle, Anita Koroknai, György Fejer, Agnes Bakos, Ferenc Banati, Kalman Szenthe, Hans Wolf, Hans Helmut Niller, Janos Minarovits, Daniel Salamon

Abstract read
In one paragraph

Article in Journal of virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
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  6. Review
  7. Nasopharyngeal carcinoma super-enhancer-driven ETV6 correlates with prognosis.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. The importance of epigenetic alterations in the development of epstein-barr virus-related lymphomas.Mediterranean journal of hematology and infectious diseases · 2009
    Article
  13. Article
  14. Role of chromatin during herpesvirus infections.Biochimica et biophysica acta · 2009
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Borbala GerleMicrobiological Research Group, National Center for Epidemiology, Pihenö u. 1, H-1529 Budapest, Hungary.
Anita Koroknai
György Fejer
Agnes Bakos
Ferenc Banati
Kalman Szenthe
Hans Wolf
Hans Helmut Niller
Janos Minarovits
Daniel Salamon
National Center for Epidemiology · HUUniversity of Regensburg · DEMax Planck Institute of Immunobiology and Epigenetics · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We analyzed the levels of acetylated histones and histone H3 dimethylated on lysine 4 (H3K4me2) at the LMP2A promoter (LMP2Ap) of Epstein-Barr virus in well-characterized type I and type III lymphoid cell line pairs and additionally in the nasopharyngeal carcinoma cell line C666-1 by using chromatin immunoprecipitation. We found that enhanced levels of acetylated histones marked the upregulated LMP2Ap in lymphoid cells. In contrast, in C666-1 cells, the highly DNA-methylated, inactive LMP2Ap was also enriched in acetylated histones and H3K4me2. Our results suggest that the combinatorial effects of DNA methylation, histone acetylation, and H3K4me2 modulate the activity of LMP2Ap.

Indexed as

Promoter Regions, GeneticAcetylationCell Line, TumorChromatin ImmunoprecipitationDNA, ViralHerpesvirus 4, HumanHistonesHumansLymphocytesMethylationMolecular Sequence DataProtein BindingViral Matrix ProteinsDNA, ViralEBV-associated membrane antigen, Epstein-Barr virusHistonesViral Matrix Proteins

Identifiers

PMID17898065
PMCPMC2169097
OpenAlexW2142291175

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.