Evidence map›Paper›PMID 17893333›Full record

ReviewProceedings of the National Academy of Sciences of the United States of America2007

Structure, dynamics, and evolution of centromeric nucleosomes.

Yamini Dalal, Takehito Furuyama, Danielle Vermaak, Steven Henikoff

Open access · greenAbstract readReview
In one paragraph

Review in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
25.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 137 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Nucleosomes at the Dawn of Eukaryotes.Genome biology and evolution · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Epigenetic Regulation inFrontiers in cell and developmental biology · 2021
    Review
  11. Article
  12. Article
  13. Article
  14. How oxygen gave rise to eukaryotic sex.Proceedings. Biological sciences · 2018
    Review
  15. Review
  16. Expressed Centromere Specific Histone 3 (Frontiers in plant science · 2017
    Article
  17. Article
  18. Promiscuous Histone Mis-Assembly Is Actively Prevented by Chaperones.Journal of the American Chemical Society · 2016
    Article
  19. Article
  20. Article

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Yamini DalalBasic Sciences Division and Howard Hughes Medical Institute, Fred Hutchinson Cancer Research Center, 1100 Fairview Avenue North, Seattle, WA 98109, USA.
Takehito Furuyama
Danielle Vermaak
Steven Henikoff
Fred Hutch Cancer Center · USHoward Hughes Medical Institute · US

Funding

Genetic Conflict Shapes Centromeres and HeterochromatinR01GM074108 · NIGMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MALIK, HARMIT S. · 2005 to 2022
$6.1M
Control of centromeric chromatin structure in DrosophilaF32GM071230 · NIGMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI FURUYAMA, TAKEHITO · 2004 to 2006
$154k
NIGMS NIH HHS F32 GM071230NIGMS NIH HHS F32-GM071230NIGMS NIH HHS R01 GM074108NIGMS NIH HHS R01-GM074108
6 · The paper itself

Abstract

Centromeres are defining features of eukaryotic chromosomes, providing sites of attachment for segregation during mitosis and meiosis. The fundamental unit of centromere structure is the centromeric nucleosome, which differs from the conventional nucleosome by the presence of a centromere-specific histone variant (CenH3) in place of canonical H3. We have shown that the CenH3 nucleosome core found in interphase Drosophila cells is a heterotypic tetramer, a "hemisome" consisting of one molecule each of CenH3, H4, H2A, and H2B, rather than the octamer of canonical histones that is found in bulk nucleosomes. The surprising discovery of hemisomes at centromeres calls for a reevaluation of evidence that has long been interpreted in terms of a more conventional nucleosome. We describe how the hemisome structure of centromeric nucleosomes can account for enigmatic properties of centromeres, including kinetochore accessibility, epigenetic inheritance, rapid turnover of misincorporated CenH3, and transcriptional quiescence of pericentric heterochromatin. Structural differences mediated by loop 1 are proposed to account for the formation of stable tetramers containing CenH3 rather than stable octamers containing H3. Asymmetric CenH3 hemisomes might interrupt the global condensation of octameric H3 arrays and present an asymmetric surface for kinetochore formation. We suggest that this simple mechanism for differentiation between centromeric and packaging nucleosomes evolved from an archaea-like ancestor at the dawn of eukaryotic evolution.

Indexed as

AnimalsArchaeaBiological EvolutionCentromereDrosophilaHeLa CellsHistonesHumansKinetochoresMicroscopy, Atomic ForceModels, MolecularMolecular ChaperonesMultiprotein ComplexesNucleosomesProtein Structure, QuaternarySaccharomyces cerevisiaeHistonesMolecular ChaperonesMultiprotein ComplexesNucleosomes

Identifiers

PMID17893333
PMCPMC1993840
OpenAlexW2141097743

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.