Evidence map›Paper›PMID 17890305›Full record

ArticleJournal of bacteriology2007

Flavin-dependent thymidylate synthase ThyX activity: implications for the folate cycle in bacteria.

Damien Leduc, Frédéric Escartin, H Frederik Nijhout, Michael C Reed, Ursula Liebl, Stéphane Skouloubris, Hannu Myllykallio

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 36 citations in OpenAlex.

  1. Carmofur Exhibits Antimicrobial Activity AgainstAntibiotics (Basel, Switzerland) · 2025
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  15. Flavin-dependent thymidylate synthase X limits chromosomal DNA replication.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Damien LeducINSERM Avenir group, Institut de Génétique et de Microbiologie, CNRS UMR8621, F-91405 Orsay, France.
Frédéric Escartin
H Frederik Nijhout
Michael C Reed
Ursula Liebl
Stéphane Skouloubris
Hannu Myllykallio
Centre National de la Recherche Scientifique · FRDuke University · USÉcole Polytechnique · FRUniversité Paris-Sud · FR

Funding

Modeling Folate, One-Carbon Metabolism &DNA MethylationR01CA105437 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI ULRICH, CORNELIA M · 2004 to 2007
$914k
NCI NIH HHS 5R01-CA105437NCI NIH HHS R01 CA105437
6 · The paper itself

Abstract

Although flavin-dependent ThyX proteins show thymidylate synthase activity in vitro and functionally complement thyA defects in heterologous systems, direct proof of their cellular functions is missing. Using insertional mutagenesis of Rhodobacter capsulatus thyX, we constructed the first defined thyX inactivation mutant. Phenotypic analyses of the obtained mutant strain confirmed that R. capsulatus ThyX is required for de novo thymidylate synthesis. Full complementation of the R. capsulatus thyX::spec strain to thymidine prototrophy required not only the canonical thymidylate synthase ThyA but also the dihydrofolate reductase FolA. Strikingly, we also found that addition of exogenous methylenetetrahydrofolate transiently inhibited the growth of the different Rhodobacter strains used in this work. To rationalize these experimental results, we used a mathematical model of bacterial folate metabolism. This model suggests that a very low dihydrofolate reductase activity is enough to rescue significant thymidylate synthesis in the presence of ThyX proteins and is in agreement with the notion that intracellular accumulation of folates results in growth inhibition. In addition, our observations suggest that the presence of flavin-dependent thymidylate synthase X provides growth benefits under conditions in which the level of reduced folate derivatives is compromised.

Indexed as

FlavinsFolic AcidGene Expression Regulation, BacterialGenome, BacterialModels, BiologicalRhodobacter capsulatusTetrahydrofolate DehydrogenaseTetrahydrofolatesThymidine MonophosphateThymidylate Synthase5,6,7,8-tetrahydrofolic acidFlavinsFolic AcidTetrahydrofolate DehydrogenaseTetrahydrofolatesThymidine MonophosphateThymidylate Synthase

Identifiers

PMID17890305
PMCPMC2168944
OpenAlexW2137149377

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.