Evidence map›Paper›PMID 17884915›Full record

ArticleNucleic acids research2007

The mitochondrial transcription termination factor mTERF modulates replication pausing in human mitochondrial DNA.

Anne K Hyvärinen, Jaakko L O Pohjoismäki, Aurelio Reyes, Sjoerd Wanrooij, Takehiro Yasukawa, Pekka J Karhunen, Johannes N Spelbrink, Ian J Holt, Howard T Jacobs

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 133 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Cytosine methylase and hydroxymethylase activity in mammalian mitochondria.Frontiers in cell and developmental biology · 2025
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Mechanisms of mammalian mitochondrial transcription.Protein science : a publication of the Protein Society · 2019
    Review
  16. Marek's Disease Virus Infection Induced Mitochondria Changes in Chickens.International journal of molecular sciences · 2019
    Article
  17. Article
  18. Article
  19. Article
  20. PrimPol is required for replication reinitiation after mtDNA damage.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 3 countries.

Anne K HyvärinenInstitute of Medical Technology and Tampere University Hospital, FI-33014, University of Tampere, Finland.
Jaakko L O Pohjoismäki
Aurelio Reyes
Sjoerd Wanrooij
Takehiro Yasukawa
Pekka J Karhunen
Johannes N Spelbrink
Ian J Holt
Howard T Jacobs
University of Glasgow · GBMRC Human Nutrition Research · GBTampere University · FITampere University Hospital · FITampere University of Applied Sciences · FIUnité de Nutrition Humaine · FR

Funding

Medical Research Council MC_U105663140
6 · The paper itself

Abstract

The mammalian mitochondrial transcription termination factor mTERF binds with high affinity to a site within the tRNA(Leu(UUR)) gene and regulates the amount of read through transcription from the ribosomal DNA into the remaining genes of the major coding strand of mitochondrial DNA (mtDNA). Electrophoretic mobility shift assays (EMSA) and SELEX, using mitochondrial protein extracts from cells induced to overexpress mTERF, revealed novel, weaker mTERF-binding sites, clustered in several regions of mtDNA, notably in the major non-coding region (NCR). Such binding in vivo was supported by mtDNA immunoprecipitation. Two-dimensional neutral agarose gel electrophoresis (2DNAGE) and 5' end mapping by ligation-mediated PCR (LM-PCR) identified the region of the canonical mTERF-binding site as a replication pause site. The strength of pausing was modulated by the expression level of mTERF. mTERF overexpression also affected replication pausing in other regions of the genome in which mTERF binding was found. These results indicate a role for TERF in mtDNA replication, in addition to its role in transcription. We suggest that mTERF could provide a system for coordinating the passage of replication and transcription complexes, analogous with replication pause-region binding proteins in other systems, whose main role is to safeguard the integrity of the genome whilst facilitating its efficient expression.

Indexed as

DNA ReplicationGenome, MitochondrialBasic-Leucine Zipper Transcription FactorsBinding SitesCell LineDNA, MitochondrialHumansMitochondrial ProteinsNADH DehydrogenaseRNA InterferenceRNA, Transfer, LeuBasic-Leucine Zipper Transcription FactorsDNA, MitochondrialMitochondrial ProteinsMTERF1 protein, humanNADH DehydrogenaseNADH dehydrogenase subunit 1, humanRNA, Transfer, Leu

Identifiers

PMID17884915
PMCPMC2095818
OpenAlexW1993401855

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.