Evidence map›Paper›PMID 17881451›Full record

ArticleJournal of virology2007

In vivo changes in the patterns of chromatin structure associated with the latent herpes simplex virus type 1 genome in mouse trigeminal ganglia can be detected at early times after butyrate treatment.

Donna M Neumann, Partha S Bhattacharjee, Nicole V Giordani, David C Bloom, James M Hill

Abstract read
In one paragraph

Article in Journal of virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 88 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Varicella Zoster Virus Neuronal Latency and Reactivation Modeled in Vitro.Current topics in microbiology and immunology · 2023
    Review
  8. Histone modifiers at the crossroads of oncolytic and oncogenic viruses.Molecular therapy : the journal of the American Society of Gene Therapy · 2022
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Herpesvirus latency.The Journal of clinical investigation · 2020
    Review
  15. Review
  16. Review
  17. Article
  18. Article
  19. [Mechanisms of herpes simplex virus latency and reactivation].Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2019
    Review
  20. Review

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Donna M NeumannDepartment of Ophthalmology (LSU Eye Center of Excellence), Louisiana State University Health Sciences Center, New Orleans, Louisiana 70112, USA.
Partha S Bhattacharjee
Nicole V Giordani
David C Bloom
James M Hill
Florida College · USLouisiana State University Health Sciences Center New Orleans · USUniversity of Florida · US

Funding

Molecular Genetics of HSV ReactivationR01AI048633 · NIAID · UNIVERSITY OF FLORIDA · PI BLOOM, DAVID C. · 2001 to 2023
$7.2M
OCULAR HSV: LATENCY, REACTIVATION, &RECURRENCER01EY006311 · NEI · LSU HEALTH SCIENCES CENTER · PI HILL, JAMES M · 1985 to 2012
$5.3M
PHARMACOLOGY AND EXTERNAL OCULAR DISEASEP30EY002377 · NEI · LSU HEALTH SCIENCES CENTER · PI BEUERMAN, ROGER WILMER · 1985 to 2008
$4.9M
BASIC MICROBIOLOGY &INFECTIOUS DISEASEST32AI007110 · NIAID · UNIVERSITY OF FLORIDA · PI Stephanie M Karst · 1985 to 2026
$4.3M
Ocular HSV-1: Chromatin Remodeling in Latent TGF32EY016316 · NEI · LSU HEALTH SCIENCES CENTER · PI NEUMANN, DONNA M · 2004 to 2006
$134k
NEI NIH HHS F32 EY016316NEI NIH HHS F32EY016316NEI NIH HHS P30 EY002377NEI NIH HHS P30EY002377NEI NIH HHS R01 EY006311NEI NIH HHS R01EY006311NIAID NIH HHS AI07110NIAID NIH HHS AI48633NIAID NIH HHS R01 AI048633NIAID NIH HHS T32 AI007110
6 · The paper itself

Abstract

During herpes simplex virus type 1 (HSV-1) latency in mouse dorsal root ganglia (DRG), chromatin associated with the latency-associated transcript (LAT) region of the viral genome is hyperacetylated at lysines 9 and 14 of histone 3 [H3(K9, K14)], while lytic genes are hypoacetylated. Explanted DRG exhibit a pattern of deacetylation of the LAT enhancer followed by acetylation of the ICP0 promoter at early times postexplant. Recently, we reported that sodium butyrate induced in vivo reactivation of HSV-1 in latent mice. In this study, we assessed the effect of sodium butyrate on the chromatin patterns of latent and butyrate-treated mouse trigeminal ganglia (TG) via chromatin immunoprecipitation (ChIP). We detected deacetylation of acetyl H3(K9, K14) of the LAT promoter and LAT enhancer regions as early as 0.5 h post-butyrate treatment, and this deacetylation corresponded to an increase in the acetylation of the lytic promoters ICP0 and ICP4 at 0.5 h and 1 h post-butyrate treatment, respectively. This is the first study to combine in vivo reactivation with the examination of the HSV-1 genome through ChIP assays at early times after the introduction of in vivo reactivation stimuli.

Indexed as

AnimalsButyratesChromatinChromatin Assembly and DisassemblyChromatin ImmunoprecipitationDNA, ViralEnzyme InhibitorsFemaleHerpesvirus 1, HumanHistone Deacetylase InhibitorsHistonesMicePromoter Regions, GeneticTrigeminal GanglionVirus ActivationButyratesChromatinDNA, ViralEnzyme InhibitorsHistone Deacetylase InhibitorsHistones

Identifiers

PMID17881451
PMCPMC2169074
OpenAlexW2139798327

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.