Evidence map›Paper›PMID 17879154›Full record

ArticleJournal of autism and developmental disorders2008

Sequencing and analyzing the t(1;7) reciprocal translocation breakpoints associated with a case of childhood-onset schizophrenia/autistic disorder.

Jacquelyn R Idol, Anjene M Addington, Robert T Long, Judith L Rapoport, Eric D Green

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In one paragraph

Article in Journal of autism and developmental disorders, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jacquelyn R IdolGenome Technology Branch, National Human Genome Research Institute, National Institutes of Health, 50 South Drive, Bethesda, MD 20892, USA.
Anjene M Addington
Robert T Long
Judith L Rapoport
Eric D Green
National Institutes of Health · USNational Institute of Mental Health · US

Funding

Inter- and Intra-Species Comparative SequencingZIBHG000196 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI THOMAS, JAMES · 2009 to 2025
$177.6M
Multi-Species Comparative Sequencing of Targeted GenomicZ01HG000196 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI GREEN, ERIC · 2001 to 2008
$19.1M
Structural /Functional Analysis of Mammalian ChromosomesZ01HG000060 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI GREEN, ERIC · 1995 to 2008
$6.8M
Structural and Functional Analysis of Mammalian ChromosomesZIAHG000060 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI GREEN, ERIC · 2009 to 2010
$4.3M
Intramural NIH HHS
6 · The paper itself

Abstract

We characterized a t(1;7)(p22;q21) reciprocal translocation in a patient with childhood-onset schizophrenia (COS) and autism using genome mapping and sequencing methods. Based on genomic maps of human chromosome 7 and fluorescence in situ hybridization (FISH) studies, we delimited the region of 7q21 harboring the translocation breakpoint to a approximately 16-kb interval. A cosmid containing the translocation-associated 1:7 junction on der(1) was isolated and sequenced, revealing the positions on chromosomes 1 and 7, respectively, where the translocation occurred. PCR-based studies enabled the isolation and sequencing of the reciprocal 7:1 junction on der(7). No currently recognized gene on either chromosome appears to be disrupted by the translocation. We further found no evidence for copy-number differences in the genomic regions flanking the translocation junctions in the patient. Our efforts provide sequence-based information about a schizophrenia/autism-associated translocation, and may facilitate future studies investigating the genetic bases of these disorders.

Indexed as

Autistic DisorderChromosome MappingChromosomes, Human, Pair 22Chromosomes, Human, Pair 7Cloning, MolecularCosmidsDiagnostic and Statistical Manual of Mental DisordersHumansIn Situ Hybridization, FluorescencePolymerase Chain ReactionProto-Oncogene Proteins c-bcrSchizophrenia, ChildhoodTranslocation, GeneticBCR protein, humanProto-Oncogene Proteins c-bcr

Identifiers

PMID17879154
OpenAlexW2050474581

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.