Evidence map›Paper›PMID 17878308›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Pathogenic mechanism of a human mitochondrial tRNAPhe mutation associated with myoclonic epilepsy with ragged red fibers syndrome.

Jiqiang Ling, Hervé Roy, Daoming Qin, Mary Anne T Rubio, Juan D Alfonzo, Kurt Fredrick, Michael Ibba

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Tissue-specific mitochondrial DNA,Molecular genetics and metabolism reports · 2025
    Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Mitochondrial transcript maturation and its disorders.Journal of inherited metabolic disease · 2015
    Review
  9. tRNA biology in mitochondria.International journal of molecular sciences · 2015
    Review
  10. Article
  11. Article
  12. Mechanistic insights into cognate substrate discrimination during proofreading in translation.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jiqiang LingOhio State Biochemistry Program, Ohio State University, Columbus, OH 43210, USA.
Hervé Roy
Daoming Qin
Mary Anne T Rubio
Juan D Alfonzo
Kurt Fredrick
Michael Ibba
The Ohio State University · USState Library of Ohio · US

Funding

Molecular analysis of accurate ribosomal translocationR01GM072528 · NIGMS · OHIO STATE UNIVERSITY · PI Kurt L Fredrick · 2005 to 2026
$5.8M
NIGMS NIH HHS GM072528NIGMS NIH HHS R01 GM072528
6 · The paper itself

Abstract

Human mitochondrial tRNA (hmt-tRNA) mutations are associated with a variety of diseases including mitochondrial myopathies, diabetes, encephalopathies, and deafness. Because the current understanding of the precise molecular mechanisms of these mutations is limited, there is no efficient method to treat their associated mitochondrial diseases. Here, we use a variety of known mutations in hmt-tRNA(Phe) to investigate the mechanisms that lead to malfunctions. We tested the impact of hmt-tRNA(Phe) mutations on aminoacylation, structure, and translation elongation-factor binding. The majority of the mutants were pleiotropic, exhibiting defects in aminoacylation, global structure, and elongation-factor binding. One notable exception was the G34A anticodon mutation of hmt-tRNA(Phe) (mitochondrial DNA mutation G611A), which is associated with MERRF (myoclonic epilepsy with ragged red fibers). In vitro, the G34A mutation decreases aminoacylation activity by 100-fold, but does not affect global folding or recognition by elongation factor. Furthermore, G34A hmt-tRNA(Phe) does not undergo adenosine-to-inosine (A-to-I) editing, ruling out miscoding as a possible mechanism for mitochondrial malfunction. To improve the aminoacylation state of the mutant tRNA, we modified the tRNA binding domain of the nucleus-encoded human mitochondrial phenylalanyl-tRNA synthetase, which aminoacylates hmt-tRNA(Phe) with cognate phenylalanine. This variant enzyme displayed significantly improved aminoacylation efficiency for the G34A mutant, suggesting a general strategy to treat certain classes of mitochondrial diseases by modification of the corresponding nuclear gene.

Indexed as

AnticodonBase SequenceEpilepsies, MyoclonicHumansKineticsMERRF SyndromeMitochondriaMolecular ConformationMolecular Sequence DataMutationNucleic Acid ConformationPeptide Elongation Factor TuPhenylalanineRNARNA, MitochondrialRNA, Transfer, PheAnticodonPeptide Elongation Factor TuPhenylalanineRNARNA, MitochondrialRNA, Transfer, Phe

Identifiers

PMID17878308
PMCPMC2000536
OpenAlexW2040369986

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.