Evidence map›Paper›PMID 17875934›Full record

ArticleMolecular and cellular biology2007

Hmo1 is required for TOR-dependent regulation of ribosomal protein gene transcription.

Axel B Berger, Laurence Decourty, Gwenaël Badis, Ulf Nehrbass, Alain Jacquier, Olivier Gadal

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 89 citations in OpenAlex.

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  8. Yeast Crf1p: An activator in need is an activator indeed.Computational and structural biotechnology journal · 2022
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  9. Review
  10. Article
  11. Regulation of ribosomal protein genes: An ordered anarchy.Wiley interdisciplinary reviews. RNA · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Axel B BergerUnité de Biologie Cellulaire du Noyau, Unité de Génétique des Interactions Macromoléculaires, CNRS URA 2171, Institut Pasteur, 25 rue du Docteur Roux, 75724 Paris cedex 15, France.
Laurence Decourty
Gwenaël Badis
Ulf Nehrbass
Alain Jacquier
Olivier Gadal
Centre National de la Recherche Scientifique · FRInstitut Pasteur · FRLaboratoire Dynamique de la Biodiversité · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ribosome biogenesis requires equimolar amounts of four rRNAs and all 79 ribosomal proteins (RP). Coordinated regulation of rRNA and RP synthesis by eukaryotic RNA polymerases (Pol) I, III, and II is a key requirement for growth control. Using a novel global genetic approach, we showed that the absence of Hmo1 becomes lethal when combined with mutations of components of either the RNA Pol II or Pol I transcription machineries, of specific RP, or of the TOR pathway. Hmo1 directly interacts with both the region transcribed by Pol I and a subset of RP gene promoters. Down-regulation of Hmo1 expression affects RP gene expression. Upon TORC1 inhibition, Hmo1 dissociates from ribosomal DNA (rDNA) and some RP gene promoters simultaneously. Finally, in the absence of Hmo1, TOR-dependent repression of RP genes is alleviated. Therefore, we show here that Saccharomyces cerevisiae Hmo1 is directly involved in coordinating rDNA transcription by Pol I and RP gene expression by Pol II under the control of the TOR pathway.

Indexed as

Gene Expression Regulation, FungalRibosomal ProteinsTranscription, GeneticAntibiotics, AntineoplasticDNA-Directed RNA PolymerasesDNA Mutational AnalysisDNA, RibosomalHigh Mobility Group ProteinsPromoter Regions, GeneticProtein Serine-Threonine KinasesRNA, RibosomalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSirolimusTranscription FactorsAntibiotics, AntineoplasticDNA-Directed RNA PolymerasesDNA, RibosomalHigh Mobility Group ProteinsHMO1 protein, S cerevisiaeProtein Serine-Threonine KinasesRibosomal ProteinsRNA, RibosomalSaccharomyces cerevisiae ProteinsSirolimustarget of rapamycin protein, S cerevisiaeTranscription Factors

Identifiers

PMID17875934
PMCPMC2169146
OpenAlexW2129681372

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.