Evidence map›Paper›PMID 17854505›Full record

ArticleBMC biology2007

A conserved gene family encodes transmembrane proteins with fibronectin, immunoglobulin and leucine-rich repeat domains (FIGLER).

Delicia L Munfus, Christopher L Haga, Peter D Burrows, Max D Cooper

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Delicia L MunfusDivision of Developmental and Clinical Immunology, University of Alabama at Birmingham, Birmingham, AL 35294-3300, USA. dlmunfus@uasom.uab.edu
Christopher L Haga
Peter D Burrows
Max D Cooper
University of Alabama at Birmingham · USUniversity of Alabama at Birmingham Hospital · US

Funding

IMMUNOLOGIC DISEASES AND BASIC IMMUNOLOGYT32AI007051 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Laurie Ellen Harrington · 1985 to 2026
$13.1M
Comparison of B Cell Differentiation in Mice and HumansR37AI039816 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI COOPER, MAX DALE · 2001 to 2010
$3.8M
TGF-Beta Regulates B Lymphocyte Development &FunctionR01AI048098 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI BURROWS, PETER DANIEL · 2001 to 2005
$1.3M
COMPARATIVE ONTOGENETIC APPROACH TO VACCINE STRATEGYR01AI039816 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI COOPER, MAX D · 1995 to 1999
–
NIAID NIH HHS AI39816NIAID NIH HHS AI48098NIAID NIH HHS R01 AI039816NIAID NIH HHS R01 AI048098NIAID NIH HHS R37 AI039816NIAID NIH HHS T32 AI007051
6 · The paper itself

Abstract

backgroundIn mouse the cytokine interleukin-7 (IL-7) is required for generation of B lymphocytes, but human IL-7 does not appear to have this function. A bioinformatics approach was therefore used to identify IL-7 receptor related genes in the hope of identifying the elusive human cytokine.

resultsOur database search identified a family of nine gene candidates, which we have provisionally named fibronectin immunoglobulin leucine-rich repeat (FIGLER). The FIGLER 1-9 genes are predicted to encode type I transmembrane glycoproteins with 6-12 leucine-rich repeats (LRR), a C2 type Ig domain, a fibronectin type III domain, a hydrophobic transmembrane domain, and a cytoplasmic domain containing one to four tyrosine residues. Members of this multichromosomal gene family possess 20-47% overall amino acid identity and are differentially expressed in cell lines and primary hematopoietic lineage cells. Genes for FIGLER homologs were identified in macaque, orangutan, chimpanzee, mouse, rat, dog, chicken, toad, and puffer fish databases. The non-human FIGLER homologs share 38-99% overall amino acid identity with their human counterpart.

conclusionThe extracellular domain structure and absence of recognizable cytoplasmic signaling motifs in members of the highly conserved FIGLER gene family suggest a trophic or cell adhesion function for these molecules.

Indexed as

Multigene FamilyAmino Acid SequenceAnimalsConserved SequenceFibronectinsGene ExpressionHumansImmunoglobulinsLeucine-Rich Repeat ProteinsProteinsProtein Structure, TertiaryProtein TransportReceptors, Interleukin-7Sequence HomologySpecies SpecificityFibronectinsImmunoglobulinsLeucine-Rich Repeat ProteinsProteinsReceptors, Interleukin-7

Identifiers

PMID17854505
PMCPMC2094703
OpenAlexW2043787941

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.