Evidence map›Paper›PMID 17854037›Full record

ArticleJournal of medical virology2007

Molecular characterization of G11P[25] and G3P[3] human rotavirus strains associated with asymptomatic infection in South India.

Indrani Banerjee, Miren Iturriza-Gomara, Priya Rajendran, Beryl Primrose, Sasirekha Ramani, James J Gray, David W Brown, Gagandeep Kang

Open access · greenAbstract read
In one paragraph

Article in Journal of medical virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 41 citations in OpenAlex.

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  9. Molecular epidemiology of rotaviruses in Bulgaria: annual shift of the predominant genotype.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2010
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Indrani BanerjeeDepartment of Gastrointestinal Sciences, Christian Medical College, Vellore, India.
Miren Iturriza-Gomara
Priya Rajendran
Beryl Primrose
Sasirekha Ramani
James J Gray
David W Brown
Gagandeep Kang
Christian Medical College & Hospital · IN

Funding

Wellcome Trust 063144
6 · The paper itself

Abstract

Rotaviruses are the major etiological agents of diarrhea in children less than 5 years of age. Two unusual rotavirus strains not previously reported in India, G11P[25] (CRI 10795) and G3P[3] (CRI 33594) were isolated from faecal samples of asymptomatic children in India. The strains were characterized by sequence analysis of the genes encoding the VP7, VP4, VP6, and NSP4. The G11P[25] strain was closely related to the human G11P[25] strains from Bangladesh (with 98% identity at the nucleotide [nt] level and the amino acid [aa] level for the VP7 gene and 96% identity at the nt and 98% at the aa level for the VP4 gene). The G3P[3] strain was found to be related to a G3P[3] strain isolated in Thailand (CMH222; 88% identity at the nt level and 97% at aa level for the VP7 gene and 84% identity at the nt level and 90% at the aa level for the VP4 gene). Phylogenetic analysis of the VP6 and the NSP4 genes revealed that the Vellore G11P[25] strain was of VP6 subgroup II and NSP4 genotype B. The G3P[3] strain was identified as NSP4 genotype C and the VP6 gene showed 97% identity at the deduced amino acid level with strain CMH222 (Thailand) strain but did not cluster with sequences of SGI, SGII, SGI+II or SG-nonI/nonII. Both strains had gene segments of animal rotavirus origin suggesting inter-species transmission of rotavirus, and in the case of G11P[25] possibly underwent reassortment subsequently with human strains resulting in an animal-human hybrid strain.

Indexed as

AnimalsAntigens, ViralCapsid ProteinsCatsCattleDogsFecesGenotypeGlycoproteinsHumansIndiaMiceMolecular Sequence DataPhylogenyRotavirusRotavirus InfectionsAntigens, ViralCapsid ProteinsGlycoproteinsNS28 protein, rotavirusToxins, BiologicalViral Nonstructural ProteinsVP4 protein, RotavirusVP6 protein, RotavirusVP7 protein, Rotavirus

Identifiers

PMID17854037
PMCPMC2465802
OpenAlexW2025562196

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.