Evidence map›Paper›PMID 17846170›Full record

ArticleThe Journal of cell biology2007

Defining early steps in mRNA transport: mutant mRNA in myotonic dystrophy type I is blocked at entry into SC-35 domains.

Kelly P Smith, Meg Byron, Carol Johnson, Yigong Xing, Jeanne B Lawrence

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 65 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. RNAs as Regulators of Cellular Matchmaking.Frontiers in molecular biosciences · 2021
    Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Mechanistic determinants of MBNL activity.Nucleic acids research · 2016
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kelly P SmithDepartment of Cell Biology, University of Massachusetts Medical School, Worcester, MA 01655, USA.
Meg Byron
Carol Johnson
Yigong Xing
Jeanne B Lawrence
University of Massachusetts Chan Medical School · US

Funding

Nuclear and genomic organization of gene expressionR01GM068138 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LAWRENCE, JEANNE BENTLEY · 2003 to 2006
$1.3M
NIGMS NIH HHS GM68138NIGMS NIH HHS R01 GM068138
6 · The paper itself

Abstract

In myotonic dystrophy type 1 (DM1), triplet repeat expansion in the 3' untranslated region of dystrophia myotonica protein kinase (DMPK) causes the nuclear retention of mutant messenger RNA (mRNA). Although the DMPK gene locus positions precisely at the outer edge of a factor-rich SC-35 domain, the normal mRNA consistently accumulates within the domain, and this RNA is depleted upon transcriptional inhibition. In DM1, mutant transcripts detach from the gene but accumulate in granules that abut but do not enter SC-35 domains, suggesting that RNA entry into the domain is blocked. Despite their exclusion from these compartments, mutant transcripts are spliced. MBNL1 (muscleblind-like protein 1) is an alternative splicing factor that becomes highly concentrated with mutant RNA foci. Small interfering RNA-mediated knockdown of MBNL1 promotes the accumulation or entry of newly synthesized mutant transcripts in the SC-35 domain. Collectively, these data suggest that an initial step in the intranuclear path of some mRNAs is passage from the gene into an SC-35 domain and implicate these structures in postsplicing steps before export.

Indexed as

RNA SplicingCells, CulturedChildHumansMaleModels, MolecularMutationMyoblasts, SkeletalMyotonic DystrophyMyotonin-Protein KinaseProtein Serine-Threonine KinasesProtein Structure, TertiaryRNA-Binding ProteinsRNA, MessengerRNA TransportTrinucleotide Repeat ExpansionDMPK protein, humanMBNL1 protein, humanMyotonin-Protein KinaseProtein Serine-Threonine KinasesRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID17846170
PMCPMC2064620
OpenAlexW2020138247

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.