Evidence map›Paper›PMID 17826748›Full record

ReviewBiochemical pharmacology2007

Structure-guided drug design: conferring selectivity among neuronal nicotinic receptor and acetylcholine-binding protein subtypes.

Palmer Taylor, Todd T Talley, Zoran Radic', Scott B Hansen, Ryan E Hibbs, Jian Shi

Open access · greenAbstract readReview
In one paragraph

Review in Biochemical pharmacology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 43 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Subunit stoichiometry and arrangement in a heteromeric glutamate-gated chloride channel.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  6. Article
  7. Article
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  10. Article
  11. Article
  12. Article
  13. Expeditious synthesis ofTetrahedron letters · 2011
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Palmer TaylorDepartment of Pharmacology, Skaggs School of Pharmacy & Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA 92093-0657, USA. pwtaylor@ucsd.edu
Todd T Talley
Zoran Radic'
Scott B Hansen
Ryan E Hibbs
Jian Shi
University of California, San Diego · USUniversity of Montana · US

Funding

KINETICS OF DRUG MACROMOLECULE COMPLEX FORMATIONR37GM018360 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TAYLOR, PALMER WILLIAM · 1999 to 2008
$5.7M
Oxime-Assisted Catalysis of Organophosphates and Reactivation of AChEU01NS058046 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TAYLOR, PALMER WILLIAM · 2006 to 2011
$4.0M
Nicotinic Receptor Template-guided Drug DesignU01DA019372 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TAYLOR, PALMER WILLIAM · 2004 to 2008
$2.5M
Alpha Neurotoxin Probes of Nicotinic AChRF32NS043063 · NINDS · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI TALLEY, TODD T · 2002 to 2004
$134k
NIDA NIH HHS U01 DA019372NIGMS NIH HHS R37 GM018360NIGMS NIH HHS R37 GM18360NINDS NIH HHS F32 NS043063NINDS NIH HHS U01 NS058046
6 · The paper itself

Abstract

Neuronal nicotinic receptors, encoded by nine genes of the alpha and three of the beta type of subunits, and whose gene products assemble in distinct permutations as pentameric molecules, constitute a fertile area for structure-guided drug design. Design strategies are augmented by a wide variety of peptide, alkaloid and terpenoid toxins from various marine and terrestrial species that interact with nicotinic receptors. Also, acetylcholine-binding proteins from mollusks, as structural surrogates of the receptor that mimic its extracellular domain, provide atomic resolution templates for analysis of structure and response. Herein, we describe a structure-guided approach to nicotinic ligand design that employs crystallography of this protein as the basic template, but also takes into consideration the dynamic properties of the receptor molecules in their biological media. We present the crystallographic structures of several complexes of various agonists and antagonists that associate with the agonist site and can competitively block the action of acetylcholine. In so far as the extracellular domain is involved, we identify additional non-competitive sites at those subunit interfaces where agonists do not preferentially bind. Ligand association at these interface sites may modulate receptor function. Ligand binding is also shown by solution-based spectroscopic and spectrometric methods to affect the dynamics of discrete domains of the receptor molecule. The surrogate receptor molecules can then be employed to design ligands selective for receptor subtype through the novel methods of freeze-frame, click chemistry that uses the very structure of the target molecule as a template for synthesis of the inhibitor.

Indexed as

Drug DesignAcetylcholineAmino Acid SequenceAnimalsCarrier ProteinsCrystallizationHumansMolecular Sequence DataNicotinic AgonistsNicotinic AntagonistsReceptors, NicotinicSpectrometry, FluorescenceAcetylcholineCarrier ProteinsNicotinic AgonistsNicotinic AntagonistsReceptors, Nicotinic

Identifiers

PMID17826748
PMCPMC3341175
OpenAlexW1972268880

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.