Evidence map›Paper›PMID 17803915›Full record

ArticleCell2007

SCRAPPER-dependent ubiquitination of active zone protein RIM1 regulates synaptic vesicle release.

Ikuko Yao, Hiroshi Takagi, Hiroshi Ageta, Tomoaki Kahyo, Showbu Sato, Ken Hatanaka, Yoshiyuki Fukuda, Tomoki Chiba, Nobuhiro Morone, Shigeki Yuasa and 5 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 120 papers.

0numbers the graph read from it
0cells of the map it votes in
120citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

120 citing papers in PubMed, 202 citations in OpenAlex.

  1. Article
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  15. Article
  16. Organization of Presynaptic Autophagy-Related Processes.Frontiers in synaptic neuroscience · 2022
    Review
  17. Review
  18. Review
  19. The Ubiquitinated Axon: Local Control of Axon Development and Function by Ubiquitin.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Review
  20. Bassoon inhibits proteasome activity via interaction with PSMB4.Cellular and molecular life sciences : CMLS · 2021
    Article

60 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Ikuko YaoMitsubishi Kagaku Institute of Life Sciences (MITILS), 11 Minamiooya, Machida, Tokyo 194-8511, Japan.
Hiroshi Takagi
Hiroshi Ageta
Tomoaki Kahyo
Showbu Sato
Ken Hatanaka
Yoshiyuki Fukuda
Tomoki Chiba
Nobuhiro Morone
Shigeki Yuasa
Kaoru Inokuchi
Toshihisa Ohtsuka
Grant R Macgregor
Keiji Tanaka
Mitsutoshi Setou
Mitsubishi Group (Japan) · JPNational Center of Neurology and Psychiatry · JPTokyo Metropolitan Institute of Medical Science · JPNational Institute for Physiological Sciences · JPUniversity of California, Irvine · USUniversity of Toyama · JP

Funding

A Novel Gene Required for Sertoli-Spermatids AdhesionU01HD045913 · NICHD · UNIVERSITY OF CALIFORNIA-IRVINE · PI MACGREGOR, GRANT R · 2004 to 2008
$1.3M
NICHD NIH HHS U01 HD045913
6 · The paper itself

Abstract

Little is known about how synaptic activity is modulated in the central nervous system. We have identified SCRAPPER, a synapse-localized E3 ubiquitin ligase, which regulates neural transmission. SCRAPPER directly binds and ubiquitinates RIM1, a modulator of presynaptic plasticity. In neurons from Scrapper-knockout (SCR-KO) mice, RIM1 had a longer half-life with significant reduction in ubiquitination, indicating that SCRAPPER is the predominant ubiquitin ligase that mediates RIM1 degradation. As anticipated in a RIM1 degradation defect mutant, SCR-KO mice displayed altered electrophysiological synaptic activity, i.e., increased frequency of miniature excitatory postsynaptic currents. This phenotype of SCR-KO mice was phenocopied by RIM1 overexpression and could be rescued by re-expression of SCRAPPER or knockdown of RIM1. The acute effects of proteasome inhibitors, such as upregulation of RIM1 and the release probability, were blocked by the impairment of SCRAPPER. Thus, SCRAPPER has an essential function in regulating proteasome-mediated degradation of RIM1 required for synaptic tuning.

Indexed as

Protein Processing, Post-TranslationalSynaptic TransmissionAnimalsBrainCells, CulturedEnzyme InhibitorsExcitatory Postsynaptic PotentialsF-Box ProteinsGenotypeGTP-Binding ProteinsHalf-LifeKineticsLeupeptinsMiceMice, Inbred C57BLMice, Knockoutbenzyloxycarbonylleucyl-leucyl-leucine aldehydeEnzyme InhibitorsF-Box ProteinsFbxl20 protein, mouseGTP-Binding ProteinsLeupeptinsNerve Tissue ProteinsProteasome Endopeptidase ComplexProteasome InhibitorsRims1 protein, mouseRNA, MessengerUbiquitinUbiquitin-Protein Ligase ComplexesUbiquitin-Protein Ligases

Identifiers

PMID17803915
PMCPMC3049808
OpenAlexW2169442239

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.