ArticleGenome biology2007
Cross-species cluster co-conservation: a new method for generating protein interaction networks.
Article in Genome biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
7 citing papers in PubMed.
- SalmoNet, an integrated network of tenNPJ systems biology and applications · 2017Article
- Article
- Biomedical discovery acceleration, with applications to craniofacial development.PLoS computational biology · 2009Article
- Predicting protein linkages in bacteria: which method is best depends on task.BMC bioinformatics · 2008Article
- The topology of the bacterial co-conserved protein network and its implications for predicting protein function.BMC genomics · 2008Article
- Improving protein function prediction methods with integrated literature data.BMC bioinformatics · 2008Article
- Investigation of factors affecting prediction of protein-protein interaction networks by phylogenetic profiling.BMC genomics · 2007Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors.
Funding
Abstract
Co-conservation (phylogenetic profiles) is a well-established method for predicting functional relationships between proteins. Several publicly available databases use this method and additional clustering strategies to develop networks of protein interactions (cluster co-conservation (CCC)). CCC has previously been limited to interactions within a single target species. We have extended CCC to develop protein interaction networks based on co-conservation between protein pairs across multiple species, cross-species cluster co-conservation.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.