Evidence map›Paper›PMID 17785523›Full record

ArticleGenes & development2007

A tDNA establishes cohesion of a neighboring silent chromatin domain.

Rudra N Dubey, Marc R Gartenberg

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Binding, sliding, and function of cohesin during transcriptional activation.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  7. Review
  8. Determinants of Sir2-Mediated, Silent Chromatin Cohesion.Molecular and cellular biology · 2016
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Autoregulation of an RNA polymerase II promoter by the RNA polymerase III transcription factor III C (TF(III)C) complex.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  17. Article
  18. Article
  19. Review
  20. Insulators and promoters: closer than we think.Nature reviews. Genetics · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Rudra N DubeyDepartment of Pharmacology, Robert Wood Johnson Medical School, University of Medicine and Dentistry of New Jersey, Piscataway, New Jersey 08854, USA.
Marc R Gartenberg
Johnson University · US

Funding

Cohesin in Chromosome Architecture and Transcriptional ControlR01GM051402 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI GARTENBERG, MARC R. · 1995 to 2022
$7.9M
CHROMOSOME ARCHITECTURER55GM051402 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI GARTENBERG, MARC R. · 1994 to 1994
–
NIGMS NIH HHS GM51402NIGMS NIH HHS R01 GM051402
6 · The paper itself

Abstract

DNA replication generates sister chromatid pairs that are bound to one another until anaphase onset. The process, termed sister chromatid cohesion, requires the multisubunit cohesin complex that resides at centromeres and sites where genes converge. At the HMR mating-type locus of budding yeast, cohesin associates with a heterochromatin-like structure known as silent chromatin. In this report, we show that silent chromatin is necessary but not sufficient for cohesion of the replicating locus. A tRNA gene (tDNA) that delimits the silent chromatin domain is also required, as are subunits of the TFIIIB and RSC complexes that bind the gene. Non-tDNA boundary elements do not substitute for tDNAs in cohesion, suggesting that barrier activity is not responsible for the phenomenon. The results reveal an unexpected role for tDNAs and RNA polymerase III-associated proteins in establishment of sister chromatid cohesion.

Indexed as

Genes, Mating Type, FungalCell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneCohesinsDNA-Binding ProteinsDNA ReplicationGene SilencingModels, GeneticNuclear ProteinsRNA Polymerase IIIRNA, TransferSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsTranscription Factor TFIIBCell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneCohesinsDNA-Binding ProteinsNuclear ProteinsRNA Polymerase IIIRNA, TransferRSC complex, S cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsTranscription Factor TFIIB

Identifiers

PMID17785523
PMCPMC1950854
OpenAlexW2151357445

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.