Evidence map›Paper›PMID 17785438›Full record

ArticleMolecular and cellular biology2007

Restricting conformational flexibility of the switch II region creates a dominant-inhibitory phenotype in Obg GTPase Nog1.

Yevgeniya R Lapik, Julia M Misra, Lester F Lau, Dimitri G Pestov

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

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  14. A genome-scale protein interaction profile of Drosophila p53 uncovers additional nodes of the human p53 network.Proceedings of the National Academy of Sciences of the United States of America · 2010
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yevgeniya R LapikDepartment of Biochemistry and Molecular Genetics, University of Illinois at Chicago College of Medicine, Chicago, Illinois 60607, USA
Julia M Misra
Lester F Lau
Dimitri G Pestov
University of Illinois Chicago · US

Funding

Monitoring mechanisms in mammalian ribosome biogenesisR01GM074091 · NIGMS · UNIV OF MED/DENT NJ-SCH OSTEOPATHIC MED · PI PESTOV, DIMITRI G · 2005 to 2014
$2.4M
Ribosome Biogenesis and p53 Dependent Cell Cycle ControlR01CA095627 · NCI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI LAU, LESTER F · 2002 to 2006
$1.4M
NCI NIH HHS R01 CA095627NIGMS NIH HHS GM074091NIGMS NIH HHS R01 GM074091
6 · The paper itself

Abstract

Nog1 is a conserved eukaryotic GTPase of the Obg family involved in the biogenesis of 60S ribosomal subunits. Here we report the unique dominant-inhibitory properties of a point mutation in the switch II region of mouse Nog1; this mutation is predicted to restrict conformational mobility of the GTP-binding domain. We show that although the mutation does not significantly affect GTP binding, ectopic expression of the mutant in mouse cells disrupts productive assembly of pre-60S subunits and arrests cell proliferation. The mutant impairs processing of multiple pre-rRNA intermediates, resulting in the degradation of the newly synthesized 5.8S/28S rRNA precursors. Sedimentation analysis of nucleolar preribosomes indicates that defective Nog1 function inhibits the conversion of 32S pre-rRNA-containing complexes to a smaller form, resulting in a drastic accumulation of enlarged pre-60S particles in the nucleolus. These results suggest that conformational changes in the switch II element of Nog1 have a critical importance for the dissociation of preribosome-bound factors during intranucleolar maturation and thereby strongly influence the overall efficiency of the assembly process.

Indexed as

Amino Acid SequenceAnimalsCell NucleolusCentrifugation, Density GradientGTP PhosphohydrolasesGuanosine TriphosphateKineticsMiceMolecular Sequence DataNucleic Acid HybridizationPhenotypePoint MutationProtein Structure, TertiaryRibosomesRNA PrecursorsRNA Processing, Post-TranscriptionalGTP PhosphohydrolasesGuanosine TriphosphateNog1 protein, mouseRNA Precursors

Identifiers

PMID17785438
PMCPMC2169037
OpenAlexW2099385135

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.