Evidence map›Paper›PMID 17766373›Full record

ArticleProtein science : a publication of the Protein Society2007

Structure-based design of robust glucose biosensors using a Thermotoga maritima periplasmic glucose-binding protein.

Yaji Tian, Matthew J Cuneo, Anita Changela, Birte Höcker, Lorena S Beese, Homme W Hellinga

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Analytical chemistry · 2020
    Article
  5. Article
  6. Article
  7. Review
  8. Structure of a periplasmic glucose-binding protein from Thermotoga maritima.Acta crystallographica. Section F, Structural biology and crystallization communications · 2012
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yaji TianDepartment of Biochemistry, Duke University Medical Center, Durham, North Carolina 27710, USA.
Matthew J Cuneo
Anita Changela
Birte Höcker
Lorena S Beese
Homme W Hellinga

Funding

NIH Director's Pioneer Award (RMI)DP1OD000122 · OD · DUKE UNIVERSITY · PI HELLINGA, HOMME W. · 2004 to 2008
$3.8M
NIH HHS DP1 OD000122NIH HHS DP1 OD000122-02
6 · The paper itself

Abstract

We report the design and engineering of a robust, reagentless fluorescent glucose biosensor based on the periplasmic glucose-binding protein obtained from Thermotoga maritima (tmGBP). The gene for this protein was cloned from genomic DNA and overexpressed in Escherichia coli, the identity of its cognate sugar was confirmed, ligand binding was studied, and the structure of its glucose complex was solved to 1.7 Angstrom resolution by X-ray crystallography. TmGBP is specific for glucose and exhibits high thermostability (midpoint of thermal denaturation is 119 +/- 1 degrees C and 144 +/- 2 degrees C in the absence and presence of 1 mM glucose, respectively). A series of fluorescent conjugates was constructed by coupling single, environmentally sensitive fluorophores to unique cysteines introduced by site-specific mutagenesis at positions predicted to be responsive to ligand-induced conformational changes based on the structure. These conjugates were screened to identify engineered tmGBPs that function as reagentless fluorescent glucose biosensors. The Y13C*Cy5 conjugate is bright, gives a large response to glucose over concentration ranges appropriate for in vivo monitoring of blood glucose levels (1-30 mM), and can be immobilized in an orientation-specific manner in microtiter plates to give a reversible response to glucose. The immobilized protein retains its response after long-term storage at room temperature.

Indexed as

Thermotoga maritimaBacterial ProteinsBiosensing TechniquesCarbocyaninesCarrier ProteinsCloning, MolecularCrystallography, X-RayFluorescent DyesGlucoseHydrogen BondingLigandsModels, MolecularMutagenesis, Site-DirectedBacterial ProteinsCarbocyaninesCarrier Proteinscyanine dye 5Fluorescent DyesGlucoseLigands

Identifiers

PMID17766373
PMCPMC2204141

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.