Evidence map›Paper›PMID 17760505›Full record

ArticlePLoS biology2007

ISWI regulates higher-order chromatin structure and histone H1 assembly in vivo.

Davide F V Corona, Giorgia Siriaco, Jennifer A Armstrong, Natalia Snarskaya, Stephanie A McClymont, Matthew P Scott, John W Tamkun

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed, 159 citations in OpenAlex.

  1. Article
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  5. Article
  6. Epigenetics and Early Development.Journal of developmental biology · 2022
    Review
  7. Article
  8. The emerging role of ISWI chromatin remodeling complexes in cancer.Journal of experimental & clinical cancer research : CR · 2021
    Review
  9. Peculiarities ofInternational journal of molecular sciences · 2021
    Review
  10. Pathogenic variants inScience advances · 2021
    Article
  11. Article
  12. Article
  13. Characterising ISWI chromatin remodeler in Trypanosoma cruzi.Memorias do Instituto Oswaldo Cruz · 2020
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Davide F V CoronaDepartment of Molecular, Cell, and Developmental Biology, University of California Santa Cruz, Santa Cruz, California, United States of America.
Giorgia Siriaco
Jennifer A Armstrong
Natalia Snarskaya
Stephanie A McClymont
Matthew P Scott
John W Tamkun
University of California, Santa Cruz · USHoward Hughes Medical Institute · US

Funding

Studies of Chromatin Remodeling FactorsR01GM049883 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI TAMKUN, JOHN W. · 1993 to 2013
$3.9M
Training Program/Molecular/Cell/Developmental BiologyT32GM008646 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI STROME, SUSAN · 1999 to 2018
$3.7M
Howard Hughes Medical InstituteNIGMS NIH HHS GM49883NIGMS NIH HHS R01 GM049883NIGMS NIH HHS T32 GM008646NIGMS NIH HHS T32GM08646
6 · The paper itself

Abstract

Imitation SWI (ISWI) and other ATP-dependent chromatin-remodeling factors play key roles in transcription and other processes by altering the structure and positioning of nucleosomes. Recent studies have also implicated ISWI in the regulation of higher-order chromatin structure, but its role in this process remains poorly understood. To clarify the role of ISWI in vivo, we examined defects in chromosome structure and gene expression resulting from the loss of Iswi function in Drosophila. Consistent with a broad role in transcriptional regulation, the expression of a large number of genes is altered in Iswi mutant larvae. The expression of a dominant-negative form of ISWI leads to dramatic alterations in higher-order chromatin structure, including the apparent decondensation of both mitotic and polytene chromosomes. The loss of ISWI function does not cause obvious defects in nucleosome assembly, but results in a significant reduction in the level of histone H1 associated with chromatin in vivo. These findings suggest that ISWI plays a global role in chromatin compaction in vivo by promoting the association of the linker histone H1 with chromatin.

Indexed as

Adenosine TriphosphatasesAnimalsChromatinChromatin Assembly and DisassemblyDrosophilaGene Expression RegulationHistonesLarvaMutationTranscription FactorsTranscription, GeneticAdenosine TriphosphatasesChromatinHistonesISWI proteinTranscription Factors

Identifiers

PMID17760505
PMCPMC1951781
OpenAlexW2047384517

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.