Evidence map›Paper›PMID 17727709›Full record

ArticleGenome biology2007

Comparative genomic analysis of the Tribolium immune system.

Zhen Zou, Jay D Evans, Zhiqiang Lu, Picheng Zhao, Michael Williams, Niranji Sumathipala, Charles Hetru, Dan Hultmark, Haobo Jiang

Abstract readComparative Study
In one paragraph

Article in Genome biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 147 papers.

0numbers the graph read from it
0cells of the map it votes in
147citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

147 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Insects · 2026
    Article
  5. Article
  6. Review
  7. Article
  8. Disruption ofVirulence · 2025
    Article
  9. Article
  10. Article
  11. Activation ofInsects · 2025
    Article
  12. Pathogen growth and virulence dynamics drive the host evolution against coinfections.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Article
  14. Insect Antimicrobial Peptides as Guardians of Immunity and Beyond: A Review.International journal of molecular sciences · 2024
    Review
  15. Article
  16. A Genome-Wide Analysis of Serine Protease Inhibitors inInternational journal of molecular sciences · 2023
    Article
  17. Evolution and assembly ofOpen biology · 2023
    Article
  18. Article
  19. Article
  20. Article

87 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Zhen ZouDepartment of Entomology and Plant Pathology, Oklahoma State University, Stillwater, OK 74078, USA. zouzhen@gmail.com
Jay D Evans
Zhiqiang Lu
Picheng Zhao
Michael Williams
Niranji Sumathipala
Charles Hetru
Dan Hultmark
Haobo Jiang

Funding

Initiation and Regulation of Prophenoloxidase ActivationR01GM058634 · NIGMS · OKLAHOMA STATE UNIVERSITY STILLWATER · PI JIANG, HAOBO · 1999 to 2022
$4.0M
NIGMS NIH HHS GM58634NIGMS NIH HHS R01 GM058634
6 · The paper itself

Abstract

backgroundTribolium castaneum is a species of Coleoptera, the largest and most diverse order of all eukaryotes. Components of the innate immune system are hardly known in this insect, which is in a key phylogenetic position to inform us about genetic innovations accompanying the evolution of holometabolous insects. We have annotated immunity-related genes and compared them with homologous molecules from other species.

resultsAround 300 candidate defense proteins are identified based on sequence similarity to homologs known to participate in immune responses. In most cases, paralog counts are lower than those of Drosophila melanogaster or Anopheles gambiae but are substantially higher than those of Apis mellifera. The genome contains probable orthologs for nearly all members of the Toll, IMD, and JAK/STAT pathways. While total numbers of the clip-domain serine proteinases are approximately equal in the fly (29), mosquito (32) and beetle (30), lineage-specific expansion of the family is discovered in all three species. Sixteen of the thirty-one serpin genes form a large cluster in a 50 kb region that resulted from extensive gene duplications. Among the nine Toll-like proteins, four are orthologous to Drosophila Toll. The presence of scavenger receptors and other related proteins indicates a role of cellular responses in the entire system. The structures of some antimicrobial peptides drastically differ from those in other orders of insects.

conclusionA framework of information on Tribolium immunity is established, which may serve as a stepping stone for future genetic analyses of defense responses in a nondrosophiline genetic model insect.

Indexed as

Genes, InsectAmino Acid SequenceAnimalsAnophelesDrosophila melanogasterGenome, InsectImmune SystemImmunity, InnateMolecular Sequence DataPhylogenySignal TransductionTribolium

Identifiers

PMID17727709
PMCPMC2375007

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.